Jatropha Genome Database
- JcCA0028191.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0028191.10 - phase: 1 /pseudo/partial
(968 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29269.m000250 LIGULELESS1 protein, putative 833 0.0
>29269.m000250 LIGULELESS1 protein, putative
Length = 1050
Score = 833 bits (420), Expect = 0.0
Identities = 836/978 (85%), Gaps = 25/978 (2%)
Strand = Plus / Plus
Query: 2 tcatctgtttctggagcctcggccaggaaagttcatggtggccagcagcaaccacctagg 61
||||||| ||||| ||| |||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 82 tcatctgggtctggggccccggctaggaaggttcatggtgggcagcagcaaccacctagg 141
Query: 62 tgccaagttgaagggtgtaaagtggatctgagtgatgctaaggcttattattctaggcat 121
|| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 142 tgtcaagttgaagggtgtaaagtggatctgagtgatgctaaggcttactattcaaggcat 201
Query: 122 aaagtttgtggcatgcactccaagtctcctaaggtcattgttgctggtttagagcaaagg 181
||||||||||| |||||||| ||||||||||||||||||||||||||||| || |||||
Sbjct: 202 aaagtttgtggtatgcactctaagtctcctaaggtcattgttgctggtttggaacaaaga 261
Query: 182 ttttgccagcagtgcagtagttatgatcagatttcatcaacttcctgaatttgaccaagg 241
|||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 262 ttttgccagcagtgtagtag----------atttcatcaacttcctgaatttgaccaagg 311
Query: 242 aaaacgaagttgccgcagacgcctagctggccataatgagcggcggaggaaaccgccacc 301
|||||||||||| |||||||||||||| || ||||||||||| |||||||| || || ||
Sbjct: 312 aaaacgaagttgtcgcagacgcctagcaggtcataatgagcgacggaggaagccaccgcc 371
Query: 302 tggatcagtgttgtcttctcgctataaccgtctctcttcaacactttatgatagcagcaa 361
||||||| ||||||| |||||||||| ||| |||||||||||| ||| ||| | ||||
Sbjct: 372 tggatcactgttgtcatctcgctatagccgactctcttcaacagtttttgacaatagcag 431
Query: 362 cagaggtggaggctttcttgtggacttcagtgcttactcaaggcttagtggaagggatgc 421
||||| ||||||||||||||| ||||||||||||||| | |||||| || ||||||||
Sbjct: 432 cagagctggaggctttcttgtagacttcagtgcttacccgaggctttctgcgagggatgc 491
Query: 422 atggccaactggaagatcatcagagcgttcgcctgtaaatcaaactgcatcgacaggaag 481
|||||||| || ||| |||| ||| | ||||| || || || | |||||||
Sbjct: 492 atggccaagtgcaaggccatctgagagggtgcctgggaaccataccactggcgcaggaag 551
Query: 482 gtctattcctcatccatggcagaatagttctcagaatcctccatccaatctctatctaca 541
|||||||||| |||||||||||| ||| ||||||||||||||||| || || ||||| ||
Sbjct: 552 gtctattcctaatccatggcagactagctctcagaatcctccatctaacctttatctgca 611
Query: 542 aggatcagcagcttgtggagctggtttttccagttctggaattccttcgggagaatgctt 601
||| |||||| |||| |||||||||||||||||| || |||||| |||||||||||
Sbjct: 612 aggttcagcaa---gtgggactggtttttccagttctgaaaatccttcaggagaatgctt 668
Query: 602 cacaggagttggcattgctgactcaagctgtgctctctctcttctgtcaaatcaaccatg 661
||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 669 cacaggagtcagcatcgctgactcatcctgtgctctctctcttctgtcaaatcaaccatg 728
Query: 662 gggctcaagaaatcaagaaccaggacttggtgtgaata------------cccaaggagc 709
||| |||||||| |||| | |||| ||||| ||||| | ||||||||||
Sbjct: 729 gggttcaagaaaccaagcatcagggcttggggtgaagaacttagttgatccccaaggagc 788
Query: 710 acccatggctcaatcaacagctcctcatggtgcagctgtgaatcaatattcgaacccgtc 769
|||| |||||||||||||| |||||||||||||||||| ||||||||| | || || ||
Sbjct: 789 acccctggctcaatcaacaaatcctcatggtgcagctgtcaatcaatatccaaatccctc 848
Query: 770 ttggggtttcaagggcagtgaagctagtagcagttcgcacgagatgtgccctgatcttgg 829
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||
Sbjct: 849 ttggggtttcaagggcagtgaagctggtagcagttcgcatgagatgtgccctgatctggg 908
Query: 830 tctgggtcaaatttcacagcctttgaacagtcatttctcaggtgagcttgagctgtctca 889
||| |||||||| || |||||| || |||||||| | ||||||||||||||||||||
Sbjct: 909 tcttggtcaaatctcgcagcctcctaatggtcatttcgcgggtgagcttgagctgtctca 968
Query: 890 acagaataggaggcagtatatggaacttgaccactccagggcatttgactcttctactca 949
||| |||||||| ||||||||||||||||| ||||| ||||| | |||||||||||||||
Sbjct: 969 acaaaataggagacagtatatggaacttgatcactctagggcttatgactcttctactca 1028
Query: 950 tcacatacactggtcgct 967
||||| ||||||||||
Sbjct: 1029 gcacatgaactggtcgct 1046