Jatropha Genome Database
- JcCA0028161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0028161.10 - phase: 0 /partial
(1581 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29269.m000247 conserved hypothetical protein 1449 0.0
>29269.m000247 conserved hypothetical protein
Length = 1713
Score = 1449 bits (731), Expect = 0.0
Identities = 1355/1563 (86%)
Strand = Plus / Plus
Query: 19 attcgaaatctccctatcgacatcacattttcacgtcttggagaatggttggttgatcgg 78
||||| |||||||| |||||||| || | ||| || || ||||||||| |||||||||||
Sbjct: 19 attcgcaatctcccaatcgacataacgtcttctcggctcggagaatggctggttgatcgg 78
Query: 79 aagagagtacccgccgattggagaaaacggattgccgccgtcagagctcgaatttctaag 138
|| ||| | || | |||||||||||||||||||| ||| | ||||||||||| || ||
Sbjct: 79 aaaagaattccgtcagattggagaaaacggattgctgccattagagctcgaatctcaaaa 138
Query: 139 gagttctcctctctgcctaaggatatagatccctatttccaaacccttgaccccgaaggg 198
||||| || ||||| ||||||||||| ||||||||| ||||||| ||||| || ||||||
Sbjct: 139 gagttatcatctcttcctaaggatatcgatccctatatccaaactcttgaacctgaaggg 198
Query: 199 attgggtatttagaggccaagaaaatttatgatgttcttgtgaaaaagactccagaaagc 258
|||||||| |||||||| ||||| ||||||||| ||||||||||| ||||||||||||
Sbjct: 199 attgggtacttagaggcgaagaagatttatgatactcttgtgaaaacaactccagaaagc 258
Query: 259 cggaatatatttggtcggctatcaggtgctgctggtgcttgggaggcaattgtgcattct 318
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 259 cggaatatatttggccggctatcaggtgctgctggtgcttgggaggcaattgtgcgttct 318
Query: 319 tttgagaaggactacatctacctaggtgaggctgcacaaataataattcaaaatgtaaat 378
|||||||| || | ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 319 tttgagaaagatcatatctacctaggtgaggctgcacaaataataattcaaaatgtaact 378
Query: 379 tatgaaataccatatcagaaaaagcaggtacagaagatccagcaacaattagcagaacta 438
|||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||
Sbjct: 379 tatgaaataccatatcagaagaagcaggtacaaaagatccagcaacaactagcagaacta 438
Query: 439 gagcgcaaggaagctgatataaaaagaagtgcatctctttcagcagctaaatatattgag 498
|||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 439 gagcgcaaggaaactgatattaaaagaagtgcatctctttcagcggctaagtatatggag 498
Query: 499 gcttgtcaagagcttggactgcagggaaacaatgttagatctgaactcttagagactgca 558
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 499 gcttgtcaagagcttggattgcagggaaacaatgttagatctgaacttttagagactgca 558
Query: 559 aaatcactaccaggcacatttagcaggattcttgaagtaataaatagtgattctctgctg 618
||||| || ||| ||||||||| | ||| | ||||| |||||||||||||| || ||
Sbjct: 559 aaatcgcttccaagcacatttaaccaaattttagaagttataaatagtgattcaatgttg 618
Query: 619 cgggcaatagagtattattccacttttgtcaaagatgttcacacagaaaaggataaatcg 678
||| ||||||| |||||||||||| || | ||||||||| |||||||||||||||||
Sbjct: 619 aaggccatagagttttattccactttcgtgagagatgttcatacagaaaaggataaatct 678
Query: 679 tcatggacaatattattgaacttgaaagacattcgtgaaaaccctccatcactaaatgtt 738
||||||| | | |||| |||||| | ||| ||||||||||| || ||| | ||||||||
Sbjct: 679 tcatggatagtgttatggaacttaagagaaattcgtgaaaatcccccaactttaaatgtt 738
Query: 739 tctgctggcccagagatccttgatgctgcaaatgtgcaattaagttttgatgaatcaagt 798
|||||||||||||| ||||||||| || | ||||||||| |||| ||||
Sbjct: 739 tctgctggcccagaaatccttgatatcatgaaccttcaattaagtcacaatgagacaagc 798
Query: 799 catgtgagaggggacaaggatgctatttcagatagtattgattgggatatttctgtcgat 858
|||||||||||||||| ||| | || | |||||| |||||| |||||||||||||| |||
Sbjct: 799 catgtgagaggggacatggacgttactgcagataatattgactgggatatttctgttgat 858
Query: 859 agtgctcagattgactgggatattggagttgtggaagaaactgatgatggtggtaatggt 918
|| |||||||||||||||| ||||| | | |||||||| ||||||||| ||||||||
Sbjct: 859 agcactcagattgactgggacattggtgctacggaagaaatagatgatggtagtaatggt 918
Query: 919 ttgggtccttatgagattgtgaatgctagtgacatcttacagagttcatcacaaaatgaa 978
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 919 ttgggtccttatgaaattgtgaatgctagtgacatcttgcagagttcatcacaaaatgaa 978
Query: 979 gctgtagaatccgaacgaaccccattaaataaaggggaagacagcttgcatccagaggtt 1038
||||||||||| || || | ||| || |||||||||||| | ||||||||| ||| ||
Sbjct: 979 gctgtagaatctgatttaaactcatcaagtaaaggggaagataacttgcatccggagatt 1038
Query: 1039 tctgtatcagaaatatcttgggatattagtgttgaaacacctcaggttgatgtcattgac 1098
|||||||||||||||||||||||||| ||||||||| ||||||| ||||||| | ||
Sbjct: 1039 tctgtatcagaaatatcttgggatataagtgttgaaccacctcaaattgatgtggtggat 1098
Query: 1099 gatgtcaatttgctaaatggtagcctggaaaatcctacatttgttccagactctttaatg 1158
|||||| ||| || |||| | |||||||||||| | || ||| ||||| |||||||
Sbjct: 1099 gatgtcgattcgccaaatactggcctggaaaatcagaaatatgtcccagattctttaact 1158
Query: 1159 cacaatgcaggagtgaaggaagaaaggagccagcttttggagaccgagtacaggaataaa 1218
||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 1159 cacaactcaggagtgaaggaagaaaggagccagcttttggggactgagtacaggaataaa 1218
Query: 1219 cttcttgatgacttatatgagatcaaagcatttttgagccagcgattgactgagttgaga 1278
|| || ||||| || ||||||| ||||||||||||| || |||||| |||||||||||
Sbjct: 1219 ctgctcgatgatctacatgagatgaaagcatttttgaatcaacgattggctgagttgaga 1278
Query: 1279 aatgaagagactttgtccttgcaacatcaagtacagtctgttgctccgttggttgtgcag 1338
|||||||||||||| ||||||||||||||||| ||||||||| |||| ||||| | |||
Sbjct: 1279 aatgaagagactttatccttgcaacatcaagttcagtctgtttctcctttggtgctacag 1338
Query: 1339 cagtatactcctgatgccattgagacaatgttgtcagatgttttcttggtcatttccttg 1398
|| ||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1339 caatatgctcctgatgcaattgagacaatgttgtctgatgttttcttggtcatttccttg 1398
Query: 1399 ctgacaaataggaaaacgcgagacttgataatgattctcaattccagaaggtttctagac 1458
||||||||| | ||||| || || ||||| ||||| || || |||| ||| ||||| |||
Sbjct: 1399 ctgacaaatcgtaaaacacgcgatttgatcatgatccttaactccaaaagatttctggac 1458
Query: 1459 agactggtaagttcattggaggaaaagaagcatcacgagttgaaattaaaagaggggttg 1518
|||||||| | | ||||||||||||| ||||| || || ||||| ||||||||||| |||
Sbjct: 1459 agactggttaatacattggaggaaaaaaagcaccatgaattgaagttaaaagagggattg 1518
Query: 1519 aaggacttggcggctaaacgcatggaacttcacaattcattatcttcatcatggccaaag 1578
||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 1519 aaggacttggctgctaaacgcatggagcttcacaattctttatcttcctcatggccaaag 1578
Query: 1579 cag 1581
|||
Sbjct: 1579 cag 1581