Jatropha Genome Database

JcCA0028051.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0028051.10 - phase: 0 /partial
         (841 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29092.m000445 pentatricopeptide repeat-containing protein, putative   141   8e-33

>29092.m000445 pentatricopeptide repeat-containing protein, putative
          Length = 2454

 Score =  141 bits (71), Expect = 8e-33
 Identities = 152/179 (84%)
 Strand = Plus / Plus

                                                                       
Query: 595 ttggaatctatgacaaagagaggaataagacctaatgtgttcatttacaatgttttgatt 654
           ||||| || |||| ||| |||||| ||||||||||||| || ||||| ||||||||||||
Sbjct: 595 ttggattcaatgagaaaaagaggagtaagacctaatgtatttatttataatgttttgatt 654

                                                                       
Query: 655 ggtgggttgtgtaaagagaggagaataggagatgcagagaagctttttgatgaaatgtat 714
           |||||||| |||| ||| | ||||||| | |||||||||||| | ||||||||||||| |
Sbjct: 655 ggtgggttatgtagagaaaagagaataagggatgcagagaagatgtttgatgaaatgtgt 714

                                                                      
Query: 715 aagcggaagttggtggggagtactgtgacttataattcgcttattgatggatattgtaa 773
           ||    || ||||||||||||| ||| ||||||||| | ||||||||||| ||||||||
Sbjct: 715 aacataaatttggtggggagtattgtcacttataatactcttattgatgggtattgtaa 773