Jatropha Genome Database
- JcCA0027271.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0027271.10 + phase: 0 /pseudo/partial
(849 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013745 cation-transporting atpase plant, putative 634 0.0
29661.m000916 cation-transporting atpase plant, putative 109 3e-23
29661.m000915 cation-transporting atpase plant, putative 72 6e-12
30094.m000670 cation-transporting atpase plant, putative 52 6e-06
>30170.m013745 cation-transporting atpase plant, putative
Length = 2751
Score = 634 bits (320), Expect = 0.0
Identities = 557/636 (87%)
Strand = Plus / Plus
Query: 34 aagcctaagaactcatcggaggaagcattgcagagatggagaaagctttgctggttagtg 93
|||||||| |||||||| || ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 37 aagcctaaaaactcatctgaagaagctttgcagagatggagaaagctttgttggttagtt 96
Query: 94 aagaatcggaaacggaggtttcgtttcactgctaatctctctaaacgctttgaggccgaa 153
||||||| ||||| | ||||||||||||||||||||||||||||| ||||| || ||
Sbjct: 97 aagaatcctaaacgacgatttcgtttcactgctaatctctctaaacgatttgaagctgac 156
Query: 154 gccatccgtcgctccaatcaggagaagcttcgagttgcagttttggtctcaaaagcagct 213
|| || |||||||| ||||||||||||||| |||||||||||||||| |||||||| |||
Sbjct: 157 gctattcgtcgctcaaatcaggagaagcttagagttgcagttttggtttcaaaagctgct 216
Query: 214 cttcagtttatccattgtcttaatttgtccaatgactacactgtacctgaagaggttgaa 273
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 217 cttcagtttatccattgtctaaatttgtccagtgactacactgtacctgaagaggttgag 276
Query: 274 tctgccggttttaaaatttgtgctgacgagttggcatcaattgttgaaggacatgatgta 333
|||| |||||||||||||||||||| ||||| ||||| ||||||||||| ||||| ||
Sbjct: 277 gctgctggttttaaaatttgtgctgatgagttagcatcgattgttgaaggccatgaagtg 336
Query: 334 aagaaactgaaaattcatgacggcgtggagggtattgctgacaaactctccacgtcaatt 393
||||| || |||||||| || || ||||| | |||| || || ||||| ||| ||
Sbjct: 337 aagaagctagcaattcatggtggagttgagggcctagctgggaagctttccacatcagtt 396
Query: 394 gctgatggcatttcaacttctgaggatttgctaaacaaaaggagggaaattcatggagta 453
|||||||| || || |||||||| ||||| ||||| | ||||| |||||| ||||| ||
Sbjct: 397 gctgatggtatctctacttctgatgatttactaaatagaaggaaagaaatttatggaata 456
Query: 454 aataaattcactgaaagcccaccccggggtttctttgtttttgtttgggaagcccttcaa 513
||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||
Sbjct: 457 aataaattcactgaaagcccagcgcggggtttctgggtttttgtttgggaagcccttcaa 516
Query: 514 gatatgacacttatgatacttggtgtttgtgcctttgtgtcccttattgttggcatagct 573
|||||||| |||||||||||||| |||||||| |||| || ||| ||||||||||| |
Sbjct: 517 gatatgactcttatgatacttgggatttgtgcccttgtttctcttgttgttggcataatt 576
Query: 574 atggaaggatggccaaagggtgcccatgatggacttggaattgttgcaagtattctcctt 633
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 577 atggaagggtggccaaagggtgcccatgatggacttggaattgttgcaagtattctactt 636
Query: 634 gttgtttttgtcactgccacgagtgattataagcaa 669
||||| ||||||||||| || |||||||||| ||||
Sbjct: 637 gttgtgtttgtcactgctaccagtgattataggcaa 672
>29661.m000916 cation-transporting atpase plant, putative
Length = 2625
Score = 109 bits (55), Expect = 3e-23
Identities = 112/131 (85%)
Strand = Plus / Plus
Query: 493 tttgtttgggaagcccttcaagatatgacacttatgatacttggtgtttgtgcctttgtg 552
|||||||||||||||||||| || ||||| || ||||||||||| || ||||| ||||||
Sbjct: 490 tttgtttgggaagcccttcaggacatgactctaatgatacttggggtgtgtgcatttgtg 549
Query: 553 tcccttattgttggcatagctatggaaggatggccaaagggtgcccatgatggacttgga 612
|| || | || |||||||| | |||||||||||||| || || |||||||| ||||||
Sbjct: 550 tctctactagtgggcatagcaacagaaggatggccaaaaggggctcatgatggccttgga 609
Query: 613 attgttgcaag 623
|||||||||||
Sbjct: 610 attgttgcaag 620
Score = 54.0 bits (27), Expect = 1e-06
Identities = 84/103 (81%)
Strand = Plus / Plus
Query: 289 atttgtgctgacgagttggcatcaattgttgaaggacatgatgtaaagaaactgaaaatt 348
||||||||||| ||||| | ||| ||||||||||| |||||||| ||||| || | | ||
Sbjct: 286 atttgtgctgatgagttaggatccattgttgaaggccatgatgtgaagaagcttacattt 345
Query: 349 catgacggcgtggagggtattgctgacaaactctccacgtcaa 391
|||| || || | |||||||| || ||||||||||| ||||
Sbjct: 346 catggtggggtaaatggtattgcagaaaaactctccacttcaa 388
>29661.m000915 cation-transporting atpase plant, putative
Length = 3015
Score = 71.9 bits (36), Expect = 6e-12
Identities = 117/144 (81%)
Strand = Plus / Plus
Query: 258 acctgaagaggttgaatctgccggttttaaaatttgtgctgacgagttggcatcaattgt 317
||||||||| || || |||| |||||||| ||||||||||| ||||| | ||| |||||
Sbjct: 258 acctgaagaagtggaggctgcgggttttaagatttgtgctgatgagttagtatccattgt 317
Query: 318 tgaaggacatgatgtaaagaaactgaaaattcatgacggcgtggagggtattgctgacaa 377
||||| | |||||| ||||| ||||| |||||| |||||| | |||||||| || ||
Sbjct: 318 cgaaggccttgatgtgaagaagctgaagtttcatggcggcgtaaatggtattgcagaaaa 377
Query: 378 actctccacgtcaattgctgatgg 401
|||||||| ||| ||| ||||||
Sbjct: 378 gctctccacttcagttgttgatgg 401
>30094.m000670 cation-transporting atpase plant, putative
Length = 3114
Score = 52.0 bits (26), Expect = 6e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 722 tactagagatggcttcaggcagaaggtctccatttatgattt 763
||||||||| |||| |||||||||||| || |||||||||||
Sbjct: 714 tactagagaaggctgcaggcagaaggtttcaatttatgattt 755