Jatropha Genome Database
- JcCA0020851.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0020851.30 + phase: 0 /pseudo
(2343 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29693.m002045 Beta-glucosidase, putative 285 6e-76
>29693.m002045 Beta-glucosidase, putative
Length = 2409
Score = 285 bits (144), Expect = 6e-76
Identities = 780/990 (78%), Gaps = 4/990 (0%)
Strand = Plus / Plus
Query: 315 ccttggattggacatggcaaatttttccttctgtgacaagtcccttccctatgatgctag 374
|||||||||||||||| ||| ||| ||||||||| |||||| | ||||| | |||
Sbjct: 174 ccttggattggacatgacaacgtttggcttctgtgattcttccctttcttatgaagttag 233
Query: 375 ggctagagacttggtaaaccgtatgacattgcaagaaaaggttcaacagctcggacatgc 434
||||| ||| ||||| |||| ||||||||| ||||||| || ||||| |||||| ||
Sbjct: 234 ggctaaagatttggtgaaccaaatgacattgaaagaaaaagtgcaacaactcggagatct 293
Query: 435 ggcttatggtgtgcctaggttagggttacctaaatataattggtggtctgaagccttgca 494
|||||||| ||||||||||| || | ||||||||| | ||||||||||| || | ||
Sbjct: 294 tgcttatggggtgcctaggttgggtattcctaaatatgagtggtggtctgaggctcttca 353
Query: 495 tggtgtgtccagtacaggcccaggaactttctttgatgaagttgttcctggtgcaactag 554
|||||| || || |||||||| ||||||||||| ||||||||||||| |||||
Sbjct: 354 tggtgtctctgacgtcggtccaggaacattctttgatgatcttgttcctggtgccactag 413
Query: 555 cttccctactgtaatactcacaacagctgcttttaacgagtctttatggaaaactattgg 614
|||||||| ||||| || ||||| ||||||| |||||||||||||||| ||||||
Sbjct: 414 tttccctacaaccatacttactacagcatcttttaatgagtctttatggaaaaatattgg 473
Query: 615 tcaggctgtttcgaccgaagcaagggcaatgtacaatttaggtcgggctggattaacttt 674
|||||| | | | |||||||||||||||| |||||||||||||| |||||||| |
Sbjct: 474 tcaggcaagtgcaa---aagcaagggcaatgtataatttaggtcgggcaggattaacata 530
Query: 675 ctggagtccggttattaacgtagtaagggatcctcgatggggaagagccattgaaacacc 734
||||| || | | || ||||||||||||||||||||||||||| | |||| |||||
Sbjct: 531 ttggagcccaaatgtaaatgtagtaagggatcctcgatggggaagaactgttgagacacc 590
Query: 735 tggagaagatcctttcattgtaggtagatatgcgtctagttt-gtaagaggcttacaaga 793
|| |||||||| | ||||||| || ||||| || || ||||||||||| || ||
Sbjct: 591 cggtgaagatccatatgttgtaggaaggtatgctgttaattacgtaagaggcttgcagga 650
Query: 794 cgtggaagggactgaaaatcacccagatccagactccagacctcccaaagtttcctcaag 853
|| ||||| ||||| || || ||||| | | || |||| |||||||||||| |
Sbjct: 651 tgttgaaggtactgagaactacacagatttgaatactaggcctcttaaagtttcctcatg 710
Query: 854 ttgcaagcaatttactgcctatgatcttgaaaattggaataacaccgaacgctatatctt 913
||| ||||| | | | ||||||||| ||||||| ||| | |||||| || |||
Sbjct: 711 ttgtaagcactatgccgcctatgatgttgaaaaatggcaaggagttgaacgccttacctt 770
Query: 914 tgatgctagagtgcatgaacaagatatggtagaaacttttaatcgacctttcgagatgtg 973
||||| |||||| |||||||||||||||||| || ||| |||||||||||| |||||
Sbjct: 771 cgatgccagagtgactgaacaagatatggtagagacatttcttcgacctttcgaaatgtg 830
Query: 974 tagtaaagaaggtgatgtgagcagtattatgtgctctttcaatcgtgttaacggcatacc 1033
| |||||||| ||||| || ||| | ||||| ||||| |||||||| || || |||||
Sbjct: 831 tgtcaaagaaggagatgttagtagtgtgatgtgttcttttaatcgtgtcaatgggatacc 890
Query: 1034 tgcttgtgctgattcaaagctcttaaatcaaaccatcagaggagagtggaatcttcatgg 1093
| |||| |||||| | ||||| || || || || || |||||||| ||| ||||||||||
Sbjct: 891 tacttgcgctgatcctaagcttttgaaccagactataagaggagattgggatcttcatgg 950
Query: 1094 atatatagtatcagattgtgattccatccaagttatggttgaacgccataaatttcttga 1153
||||||||| || |||||||| || || |||| |||||||| |||||| |||||||
Sbjct: 951 atatatagtttctgattgtgactcaattgaagtaatggttgataaccataagtttcttgg 1010
Query: 1154 tgacaccaaggaggatgcagttgcaagaacacttaaagcaggcttggatctggactgtgg 1213
||||||||| |||||||| |||||| | ||||||||||||||||||| |||| |||||
Sbjct: 1011 tgacaccaatgaggatgctgttgcacaagtacttaaagcaggcttggatttggattgtgg 1070
Query: 1214 agaatactagaccaaaaacacagaagcttcagtaaagcaaggaaaggtcggggaagaaga 1273
|| ||||| ||||| || ||| ||||||| ||||||||||||| | |||| ||| |
Sbjct: 1071 aggttactacaccaattttactgaaacttcagtgaagcaaggaaaggccagggaggaata 1130
Query: 1274 catagataggtcacttaaatatctctatgt 1303
|||||||| ||||| ||||| || |||||
Sbjct: 1131 tatagatagatcactgaaatacctttatgt 1160
Score = 141 bits (71), Expect = 2e-32
Identities = 200/243 (82%)
Strand = Plus / Plus
Query: 1537 cctggttaccaaactgaacttatcaacaatgttgcgaatgctgccaaaggtccagttatt 1596
||||| ||||||||| |||| ||||| | ||||| ||||||||| || || ||||||
Sbjct: 1600 cctgggtaccaaactcaactgatcaatcaggttgccggtgctgccaatggccctgttatt 1659
Query: 1597 cttgtaatcatctcagcaggaggaatagatatcactttcgctaaaaacaatgtcaatatc 1656
||||| ||||| |||||||||| |||||||| ||||||| | | |||| || |||
Sbjct: 1660 cttgtgatcatggcagcaggaggggtagatatctctttcgcaagggataatgagaaaatc 1719
Query: 1657 aaagccattttgtgggctggataccctggagaagaaggtggtcgagccattgcagatgtt 1716
||||| |||||||||| |||||| |||||| | |||||||| | || ||||| ||||||
Sbjct: 1720 aaagctattttgtgggttggatatcctggacaggaaggtggccatgctattgctgatgtt 1779
Query: 1717 gtttttggaaaatacaatcctggaggaagactaccacttacttggcatgaagctgattat 1776
|||||||| ||||||||||||||||||||| |||| |||| ||| |||||||||||| |
Sbjct: 1780 gtttttggcaaatacaatcctggaggaagattaccgattacctggtatgaagctgatttt 1839
Query: 1777 gtt 1779
|||
Sbjct: 1840 gtt 1842
Score = 54.0 bits (27), Expect = 4e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 2248 atagactataatgcttatagtgttctgccatcaggagggcacactatcatgattggggat 2307
||||| ||||||||||| ||| || | || |||||||||||||| || ||| ||||||||
Sbjct: 2311 atagattataatgcttacagtattttaccgtcaggagggcacaccattatggttggggat 2370
Query: 2308 gat 2310
|||
Sbjct: 2371 gat 2373