Jatropha Genome Database
- JcCA0020831.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0020831.30 - phase: 0
(1359 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013796 glyceraldehyde 3-phosphate dehydrogenase, putative 1392 0.0
37452.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative 597 e-170
30131.m006931 glyceraldehyde 3-phosphate dehydrogenase, putative 100 4e-20
>30170.m013796 glyceraldehyde 3-phosphate dehydrogenase, putative
Length = 1377
Score = 1392 bits (702), Expect = 0.0
Identities = 1204/1376 (87%), Gaps = 18/1376 (1%)
Strand = Plus / Plus
Query: 1 atggccacccacgcagctctagctccttcaagaatcccggccagcaccaggcttccttcc 60
||||||||||||||||| || ||||||||||||||||| || ||||| || || || |||
Sbjct: 1 atggccacccacgcagcccttgctccttcaagaatcccagctagcacaagactcccctcc 60
Query: 61 aagacaacctactctttccctagtcaatgctcctctaagaggttagaagtagctgaattt 120
|| | | |||||||||| | |||||||||||| |||||| ||||||| ||||| |||
Sbjct: 61 aaaagcgctcactctttcccaactcaatgctcctccaagaggctagaagttgctgagttt 120
Query: 121 tctgggcttcgagccacttctcatgtaagttatgccaagaatgctactgagggatccttc 180
|||||||||||||||| |||| | | |||||||||||||||| ||||| |||||||
Sbjct: 121 tctgggcttcgagccagttcttgcatgacctatgccaagaatgctagtgaggcatccttc 180
Query: 181 tttgatgtggtggctgctcaaatgactcccaaggtagcagcatcaactccaatcagagca 240
|| ||| ||||||||||||||||| |||||||||| ||| | |||||||| | ||||||
Sbjct: 181 ttcgatttggtggctgctcaaatggctcccaaggttgcaacctcaactcctactagagca 240
Query: 241 gaaacagtagcaaaactcaaggtagcaatcaatggattcggacgcattggcaggaacttc 300
|||||||| || ||||| ||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 241 gaaacagtggccaaactgaaggtggcaatcaatggatttggacgcattggcaggaacttc 300
Query: 301 ctcagatgctggcatggccgcaaggactctccccttgaagtgatcgttgtcaatgacagt 360
|||||||||||||||||||| || |||||||||||||| |||||||| |||||||||||
Sbjct: 301 ctcagatgctggcatggccggaaagactctccccttgacgtgatcgtcgtcaatgacagc 360
Query: 361 gctggtgtcaagaacgctgctcacttgctgaaatatgattccatgcttggaacatttaaa 420
| ||||||||||| ||| ||||||||||||| ||||| ||||||||||| || || |||
Sbjct: 361 ggcggtgtcaagaatgcttctcacttgctgaagtatgactccatgcttgggactttcaaa 420
Query: 421 gcagacgtgaaaattgtggatgatagcaccatcagtgtggatgggaagcacatcaaggtt 480
||||| ||||||||||||||| ||| |||||||||||| ||||| || | ||||||||||
Sbjct: 421 gcagatgtgaaaattgtggataataccaccatcagtgttgatggaaaacccatcaaggtt 480
Query: 481 gtctccaacagagaccctcttaagcttccatgggctgaacttggaatagacattgtcatt 540
||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 481 gtctccaacagagaccctcttaagcttccttgggctgagcttggaattgacattgtcata 540
Query: 541 gagggaacaggagtatttgtggatggccctggtgctgggaaacatatccaagctggtgcc 600
|||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 gagggaactggagtgtttgttgatggccctggtgctgggaaacatattcaagctggtgcc 600
Query: 601 aagaaagtcatcatcactgctccagctaaaggtgctgatattccaacctatgttgttggt 660
|||||||||||||| ||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 601 aagaaagtcatcattactgctccagccaaaggtgctgacattccaacatatgttgttggt 660
Query: 661 gttaatgaaaaggattacagtcaccaggttgccaacattgtaagcaatgcttcctgtact 720
||||||||||||||||| || ||| |||||||||||||||||||||||||||| || ||
Sbjct: 661 gttaatgaaaaggattatagccacgaggttgccaacattgtaagcaatgcttcttgcacc 720
Query: 721 acgaactgtctggctccatttgtaaagatcatagatgaggaatttggcattgtcaaggga 780
|| || ||||||||||| ||||| ||| |||| |||||||||||||| ||||| ||||||
Sbjct: 721 acaaattgtctggctccttttgtgaaggtcatggatgaggaatttggtattgttaaggga 780
Query: 781 acaatgactaccactca------------------ctcctacactggagatcagagactc 822
|||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 781 acaatgacaaccactcattcctacactggagatnnntcctacactggagatcagaggctc 840
Query: 823 ttggatgcttcacaccgtgacttgagaagagccagagcagcagcactgaacattgtgcca 882
|||||||||||||||||||||||||| ||||| ||||| || ||||||||||| |||||
Sbjct: 841 ttggatgcttcacaccgtgacttgaggagagctagagctgcggcactgaacatagtgccg 900
Query: 883 acgagcaccggtgcagcgaaggctgtctctcttgtgttgcctcagctcaaaggaaagctc 942
|| ||||| |||||||| ||||| || ||||| ||| |||| || ||||| ||||||||
Sbjct: 901 acaagcactggtgcagccaaggcagtgtctctggtgctgccccaactcaagggaaagctg 960
Query: 943 aatggcattgccctccgtgtcccaacaccaaatgtctcagttgtggacttggttgtgaac 1002
||||||||||| |||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 961 aatggcattgcactccgtgtcccaacaccaaatgtctcagttgttgaccttgttgtgaat 1020
Query: 1003 gttgagaagaagggtattacagctgaagatgtcaatgcagctttcaggaaagcagcagat 1062
|||||||||||||| ||||||| ||||||||||||||||| ||||| || ||||||||
Sbjct: 1021 gttgagaagaagggccttacagcagaagatgtcaatgcagccttcagaaaggcagcagag 1080
Query: 1063 gggccattgaagggcatattggatgtctgtgatgttcctcttgtgtctgttgacttccga 1122
|||||| ||||||||||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 1081 gggccactgaagggcatattggatgtgtgcgatgttcctcttgtgtcagttgacttccga 1140
Query: 1123 tgcactgatgtttcttccaccattgactcttcattgaccatggtcatgggagatgacatg 1182
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tgcagtgatgtttcttccaccattgactcttcattgaccatggtcatgggagatgacatg 1200
Query: 1183 gtcaaggtagttgcctggtacgacaatgaatggggatacagccaaagggttgttgatttg 1242
|||||||| || ||||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 1201 gtcaaggttgtcgcctggtacgacaatgaatggggttacagccaaagggtggttgacttg 1260
Query: 1243 gcacatttggtggccaacgagtggccaggcgtggctgcaactggaagtggagatccattg 1302
||||||||||| ||| | |||||||||| | | ||||| | |||||||| ||| || ||
Sbjct: 1261 gcacatttggtagccgccaagtggccaggtgcgtctgcagcaggaagtggtgatgcactg 1320
Query: 1303 gaggagttctgtgagaaaaacccagcagacgaggagtgcaaagtttatgaagctta 1358
||||| ||||| |||| |||||||| || ||||||||||||||| |||| ||||
Sbjct: 1321 gaggacttctgcgagacgaacccagccgataaggagtgcaaagtttttgaatctta 1376
>37452.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative
Length = 582
Score = 597 bits (301), Expect = e-170
Identities = 484/545 (88%)
Strand = Plus / Plus
Query: 814 cagagactcttggatgcttcacaccgtgacttgagaagagccagagcagcagcactgaac 873
||||| ||||||||||||||||||||||||||||| ||||| ||||| || |||||||||
Sbjct: 37 cagaggctcttggatgcttcacaccgtgacttgaggagagctagagctgcggcactgaac 96
Query: 874 attgtgccaacgagcaccggtgcagcgaaggctgtctctcttgtgttgcctcagctcaaa 933
|| ||||| || ||||| |||||||| ||||| || ||||| ||| |||| || |||||
Sbjct: 97 atagtgccgacaagcactggtgcagccaaggcagtgtctctggtgctgccccaactcaag 156
Query: 934 ggaaagctcaatggcattgccctccgtgtcccaacaccaaatgtctcagttgtggacttg 993
|||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| |
Sbjct: 157 ggaaagctgaatggcattgcactccgtgtcccaacaccaaatgtctcagttgttgacctt 216
Query: 994 gttgtgaacgttgagaagaagggtattacagctgaagatgtcaatgcagctttcaggaaa 1053
|||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||| ||
Sbjct: 217 gttgtgaatgttgagaagaagggccttacagcagaagatgtcaatgcagccttcagaaag 276
Query: 1054 gcagcagatgggccattgaagggcatattggatgtctgtgatgttcctcttgtgtctgtt 1113
|||||||| |||||| ||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 277 gcagcagaggggccactgaagggcatattggatgtgtgcgatgttcctcttgtgtcagtt 336
Query: 1114 gacttccgatgcactgatgtttcttccaccattgactcttcattgaccatggtcatggga 1173
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gacttccgatgcagtgatgtttcttccaccattgactcttcattgaccatggtcatggga 396
Query: 1174 gatgacatggtcaaggtagttgcctggtacgacaatgaatggggatacagccaaagggtt 1233
||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 397 gatgacatggtcaaggttgtcgcctggtacgacaatgaatggggttacagccaaagggtg 456
Query: 1234 gttgatttggcacatttggtggccaacgagtggccaggcgtggctgcaactggaagtgga 1293
||||| |||||||||||||| ||| | |||||||||| | | ||||| | ||||||||
Sbjct: 457 gttgacttggcacatttggtagccgccaagtggccaggtgcgtctgcagcaggaagtggt 516
Query: 1294 gatccattggaggagttctgtgagaaaaacccagcagacgaggagtgcaaagtttatgaa 1353
||| || ||||||| ||||| |||| |||||||| || ||||||||||||||| ||||
Sbjct: 517 gatgcactggaggacttctgcgagacgaacccagccgataaggagtgcaaagtttttgaa 576
Query: 1354 gctta 1358
||||
Sbjct: 577 tctta 581
>30131.m006931 glyceraldehyde 3-phosphate dehydrogenase, putative
Length = 1215
Score = 99.6 bits (50), Expect = 4e-20
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 1087 gtctgtgatgttcctcttgtgtctgttgacttccgatgcactgatgtttcttccaccatt 1146
|||||||||| || ||||| || ||||| ||| | ||||| |||||||| || || ||
Sbjct: 1030 gtctgtgatgagccgcttgtttcagttgatttcaggtgcacagatgtttcatcaacagtt 1089
Query: 1147 gactcttcattgaccatggtcatgggagatgacatggtcaaggtagttgcctggtacgac 1206
||||| ||| |||||||||| ||||||||||||||||| ||||| |||||||||| ||
Sbjct: 1090 gactcatcactgaccatggtgatgggagatgacatggttaaggttattgcctggtatgat 1149
Query: 1207 aatgaatggggatacagccaaagggttgttgatttggc 1244
|| |||||||| ||| |||||||| |||||||||||
Sbjct: 1150 aacgaatggggttactctcaaagggtcgttgatttggc 1187
Score = 58.0 bits (29), Expect = 1e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 946 ggcattgccctccgtgtcccaacaccaaatgtctcagttgt 986
||||||||||| ||||| ||||| |||||||||||||||||
Sbjct: 892 ggcattgccctgcgtgttccaaccccaaatgtctcagttgt 932
Score = 56.0 bits (28), Expect = 6e-07
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 703 agcaatgcttcctgtactacgaactgtctggctccatttgtaaagatcatagatgaggaa 762
||||||||||| || ||||| ||||| || ||||| ||||| ||| || | || || ||
Sbjct: 649 agcaatgcttcttgcactaccaactgccttgctccctttgtcaaggtccttgaccagaaa 708
Query: 763 tttggcattgtcaagggaacaatgactaccactcactcctacactggagatcagag 818
|||||||| ||||||| || ||||| || |||||||| |||||||| || |||||
Sbjct: 709 tttggcatcatcaagggtaccatgacaacaactcactcatacactggtgaccagag 764