Jatropha Genome Database
- JcCA0020761.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0020761.30 + phase: 0 /partial
(929 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008874 Eukaryotic translation initiation factor 3 subunit... 1065 0.0
>30128.m008874 Eukaryotic translation initiation factor 3 subunit,
putative
Length = 2985
Score = 1065 bits (537), Expect = 0.0
Identities = 831/929 (89%)
Strand = Plus / Plus
Query: 1 atggcgacttatgccaaaccggagaacgctttaaagcgagcggaagaattgataaatgtg 60
|||||||| | ||||||||| || || ||||| |||||||| |||||||| ||||||||
Sbjct: 1 atggcgacatttgccaaacctgaaaatgctttgaagcgagctgaagaattaataaatgta 60
Query: 61 gggcagaagcaagatgctttgcaagctctgcatgatctgataacttctaagagatatcga 120
|||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 61 gggcagaagcaagatgctttacaagcgctgcatgatctgattacttcaaagagataccga 120
Query: 121 gcatggcaaaagccattggaaaaaattatgttcaaatatgttgagctatgtgttgatatg 180
|||||||| ||||||| ||||| || ||||| | |||||| ||||| ||||||||||||
Sbjct: 121 gcatggcagaagccatatgaaaagatcatgtttagatatgtagagctttgtgttgatatg 180
Query: 181 cgaaggggaagatttgcaaaggatggtttgatacagtaccgtatagtctgccaacaagta 240
|| || ||| |||||||||||||||||||||| || || |||||||| || ||||||||
Sbjct: 181 cggagaggacgatttgcaaaggatggtttgattcaatatcgtatagtatgtcaacaagtg 240
Query: 241 aatgtgaattctttggaggaggtgattaagcatttcatgcatctctccactgagaaagct 300
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 241 aatgtaaattctttggaggaggtgattaagcatttcatgcatctctctactgagaaagct 300
Query: 301 gaacaagcacgaagtcaggcacaagctttagaagatgctcttgatgttgatgaccttgaa 360
|||||||| || |||||| | ||||| || ||||| |||||||||||||| || ||||||
Sbjct: 301 gaacaagctcgtagtcagtcccaagcattggaagaagctcttgatgttgacgatcttgaa 360
Query: 361 gcagataagaggccagaagatctgatgcttagttatgtcagtggagagaaaggaaaggat 420
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcggataagaggccagaagatttgatgcttagttatgtcagtggagagaaaggaaaggat 420
Query: 421 agatctgatcgtgaacttgttaccccttggttcaagtttttgtgggagacatatagaacg 480
|| |||||||| |||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct: 421 aggtctgatcgagaacttgttaccccttggttcaagttcttgtgggaaacttatagaact 480
Query: 481 gtgcttgagatcttacgaaacaactcaaagttggaggcactatatgcgatgacagcacat 540
|||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 481 gtgcttgaaatattacgaaacaattcaaagttggaggcattatatgcgatgacagcacat 540
Query: 541 cgagctttccaattctgcaaacagtacaaaaggacaactgaatttagaaggctatgtgag 600
||||||||||||||||| || |||||||| ||||||| || ||||| || | ||||||
Sbjct: 541 cgagctttccaattctgtaagcagtacaagcggacaacagagtttaggcggttgtgtgag 600
Query: 601 attatcaggaaccatttagcaaacctcaacaaatatagagatcaaagggaccggcctgat 660
|| |||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 601 atcatcaggaatcatttagcaaatctcaacaaatatagagaccaaagggatcggcctgat 660
Query: 661 ctgtcagccccagagagcttgcagctgtaccttgatacccgatttgagcaactaaaaatt 720
|||||||| |||||||| |||||||||||||||||||| |||||||||| | ||||||
Sbjct: 661 ctgtcagctccagagagtttgcagctgtaccttgatacaagatttgagcagttgaaaatt 720
Query: 721 gctactgagcttgaactctggcaggaagcttttcggtccattgaggatatccatggatta 780
|| || ||||| ||||||||||||||||||||||||||||| || ||||| ||||| ||
Sbjct: 721 gccacagagctcgaactctggcaggaagcttttcggtccatcgaagatatttatggacta 780
Query: 781 atgtgcatggtcaaaaagactcctaagccatctttgatggtggtttactatgcgaagcta 840
||||||||||| |||||| | || ||||| |||||||||||||| |||||||| ||||||
Sbjct: 781 atgtgcatggttaaaaagtcacccaagccgtctttgatggtggtgtactatgccaagcta 840
Query: 841 actgagattttctggatttcatcgagtcatctttatcatgcttatgcatggttcaaactt 900
|| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 841 accgagattttctggatttcatcaagtcatctttatcatgcgtatgcttggttcaaactt 900
Query: 901 tttacacttcagaaaagcttcaataaaaa 929
|||| |||||||||||||||||||||||
Sbjct: 901 tttatccttcagaaaagcttcaataaaaa 929