Jatropha Genome Database
- JcCA0020761.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0020761.10 + phase: 2 /partial
(2053 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008872 WD-repeat protein, putative 2288 0.0
30073.m002232 conserved hypothetical protein 139 8e-32
29927.m000603 WD-repeat protein, putative 111 2e-23
29841.m002924 WD-repeat protein, putative 78 2e-13
>30128.m008872 WD-repeat protein, putative
Length = 3399
Score = 2288 bits (1154), Expect = 0.0
Identities = 1814/2034 (89%)
Strand = Plus / Plus
Query: 20 ggtgttaatgacttggcttttgctcatccaaacaaacaactgtgtgttgtaacctgtgga 79
||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||
Sbjct: 1363 ggtgttaatgacttggcttttgctcatccaaacaaacaattatgtgtggtaacctgtgga 1422
Query: 80 gatgataagctaataaaggtttgggatttagggggacggaaattatttaattttgaaggt 139
|||||||||||||||||||| |||||||| |||||||||||| | |||||||||||||||
Sbjct: 1423 gatgataagctaataaaggtgtgggatttggggggacggaaactgtttaattttgaaggt 1482
Query: 140 cacgaggctccagtttattctatatgtcctcaccataaagaaagcattcagtttatattc 199
|||||||| || |||||||||||||||||||| || ||||| | ||| ||||| ||||||
Sbjct: 1483 cacgaggccccggtttattctatatgtcctcatcacaaagagaacatccagttcatattc 1542
Query: 200 gcaactgctattgatggaaagataaaggcctggctatatgataatgtgggacctagagtt 259
||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||
Sbjct: 1543 tcaactgctattgatggaaaaataaaggcttggctatatgataatgtgggatctagagtc 1602
Query: 260 gattatgatgcaccaggccgctggtgcactacaatgctttacagtgctgatggtagtaga 319
|| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1603 gactatgatgctccaggccactggtgcactacaatgctttacagtgctgatggtagtaga 1662
Query: 320 ttattctcttgtggaacaagtaaagagggggattctttcctagttgaatggaacgaaagt 379
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1663 ttattctcttgtggaacaagtaaagaaggggattctttcctagttgaatggaacgaaagt 1722
Query: 380 gaaggagcgataaagaggcactatgttgggttcagaaagaaatcaactgcaggtgtagtg 439
|||||||| ||||| || || |||| ||| || |||||||||||||| |||||||| |||
Sbjct: 1723 gaaggagcaataaaaagacattatgctggatttagaaagaaatcaacagcaggtgtggtg 1782
Query: 440 cagtttgacaccacacaaaaccactttttggctgcaggtgaagatagccagataaagttt 499
||||| || ||||||||||| || ||||||||||||||||||||| | ||||||||||||
Sbjct: 1783 cagttcgataccacacaaaatcattttttggctgcaggtgaagatggacagataaagttt 1842
Query: 500 tgggatatggataataccaatgttctcacaagcacagatgcggatggtggactgccgagt 559
|||||||||||||| |||||||| || ||||||| ||||| ||||||||||| |||||
Sbjct: 1843 tgggatatggataacaccaatgtacttacaagcattgatgcagatggtggactaccgagc 1902
Query: 560 cttcctcgcttgagattcaataaggaaggaaatctacttgctgttactacagcagacaat 619
||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 1903 cttcctcgcctcagattcaataaggaaggaaatctacttgctgttactaccgcagataat 1962
Query: 620 ggttttaagatactagcaaatactgctggtctaagatcattgagagcagtagaaactcca 679
|| || |||||| | |||||| |||||||||| ||| || ||||||||||||||||||||
Sbjct: 1963 gggttcaagataattgcaaatgctgctggtctcagagcactgagagcagtagaaactcca 2022
Query: 680 gcttttgaaggattgaggtcacctattgaatcagctgcaatcaaggtttctggcgcttct 739
| |||||||| ||| || ||||| || ||||| ||||| ||||||||||| || ||||||
Sbjct: 2023 ggttttgaagcattaagatcaccgatagaatcggctgctatcaaggtttccggtgcttct 2082
Query: 740 ggtgttacaaatgtcacgccagtcaatttgaaagtggaaagaagctctcctgttaggcct 799
|||||| |||| | | ||||||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 2083 ggtgttgcaaacattagtccagtcaatctgaaagtggaaaggagctctcctgtcaggcct 2142
Query: 800 tctccaattcttaatggagttgattccatgaatagaaacatggaaaagcccagagctgtg 859
||||| |||||||||||||||||| |||||| ||||| ||||||||||| ||| |||||
Sbjct: 2143 tctcctattcttaatggagttgatcccatgagtagaagcatggaaaagctgagaactgtg 2202
Query: 860 gatgatgtaattgataaaacaaagccatggcagttggctgaaattttggattctggcgag 919
||||||||||||||||||||||||||||||||||||||||||||| | || ||| |||
Sbjct: 2203 gatgatgtaattgataaaacaaagccatggcagttggctgaaattgtagaacctgacgaa 2262
Query: 920 tgccgattagttaccttgcctgacagcagagatacttccagcaaggttgttcgacttctg 979
||| |||||||||| ||||||||||||| |||| ||||||||||||||||| ||||| |
Sbjct: 2263 tgcagattagttactttgcctgacagcacagattcttccagcaaggttgttagactttta 2322
Query: 980 tacacaaattctggtgttggcattttggcacttgggtcaaatggtattcagaagctctgg 1039
|| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 2323 tatacaaattctggtgttggcattttggctcttgggtcaaatggtattcaaaagctctgg 2382
Query: 1040 aagtggacacgcaacgaccagaatccaacaggaaaggccactgctagtgctgttccgcag 1099
|||||| |||||| || |||||||||| |||||||||||||| |||| |||||||||
Sbjct: 2383 aagtgggcacgcagtgatcagaatccaagtggaaaggccactgccggtgccgttccgcag 2442
Query: 1100 cattggcaaccaaacagtggtcttcttatggccaatgatgtggcaggcgttaaccttgaa 1159
|||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||
Sbjct: 2443 cattggcaaccaaacagtggtcttcttatggctaatgatgtctcaggtgttaaccttgaa 2502
Query: 1160 gaagcagtcccatgcatagcactttcaaagaatgactcatatgtaatgtctgctgctgga 1219
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2503 gaagcagttccatgcatagcactttcaaagaatgactcatatgtaatgtcagctgctgga 2562
Query: 1220 ggaaaggtttcactgtttaacatgatgacgttcaaggtaatgacaacattcatgtctcct 1279
|||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 2563 ggaaaggtttcactctttaacatgatgacattcaaggttatgacaacattcatgtctcct 2622
Query: 1280 cctcctgcttcaactttcctagcattccatcctcaggataataatataattgccatcgga 1339
|||||||| ||||| |||||||||||||||||||| |||||||| || || ||||| |||
Sbjct: 2623 cctcctgcctcaaccttcctagcattccatcctcaagataataacatcatagccattgga 2682
Query: 1340 atggaggattcagctatccacatttataatgttagagtggatgaggtgaaatcaaaattg 1399
|||||||||||| ||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 2683 atggaggattcaactatccatatctacaatgttagagtggatgaggtgaaatcaaaattg 2742
Query: 1400 aggggtcatcagaagagaataactggtttagctttttccaccaatcttaatatcttggtt 1459
| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2743 aagggtcaccagaagagaataactggtttagctttttccaccaatcttaatattctggtt 2802
Query: 1460 tcttcaggcgctgatgctcaactttgtgtatggagtattgatacatgggagaaaaggaaa 1519
|| || || || ||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 2803 tcatcgggtgccgatgctcaactttgtgtttggagtattgacacatgggagaaaaggaaa 2862
Query: 1520 tcagttgcaattcaaattccagtagggaaggcacctgttggggaaacccgagtacagttc 1579
||| || ||||||||||||||| ||| ||||||||| |||| |||||||||||| |||
Sbjct: 2863 tcatttacaattcaaattccagcaggaaaggcacctaccggggtaacccgagtacaattc 2922
Query: 1580 cactctgatcagacccgattattggtagttcatgagacccaattggcaatatatgatgca 1639
||||||||||||||||| ||| |||| |||||||||||||| || ||||||||||||||
Sbjct: 2923 cactctgatcagacccgcttactggtggttcatgagacccagttagcaatatatgatgcc 2982
Query: 1640 tcaaagatggaacgtgtccgacagtggttaccacaggatacattgtctgcacccctatct 1699
|| || ||||| || | || |||||| ||||||| ||| | |||||||||| |||||
Sbjct: 2983 tccaaaatggatcgcattcggcagtgggtaccacaagatgcgatgtctgcacctatatct 3042
Query: 1700 tatgcggcgtactcttgcaacagccaattaatttacgctaccttttgtgatggtaacatt 1759
||||| || ||||| |||||||||||||| |||| || ||||| ||||||||||||||
Sbjct: 3043 tatgcagcatactcctgcaacagccaattgatttttgcgtcctttcgtgatggtaacatt 3102
Query: 1760 ggagtgtttgatgctgatagcctgagactaaggtgccgtattgcttcatcagcatactta 1819
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3103 ggggtgtttgatgctgatagcctgagactaaggtgccgtattgctccatcagcatactta 3162
Query: 1820 tctcaggcggtcctgaatggaagtcaatcagtctaccctctcgtcgttgctgcacatccg 1879
|| | ||| ||| |||||||||| ||||| | |||||||| || || |||||||||||
Sbjct: 3163 tcaccggctgtcttgaatggaagccaatccatttaccctcttgttgtggctgcacatcct 3222
Query: 1880 caagaacccaaccaattatcaatagggttgacggatggatcagtgaaggtgatggaaccc 1939
|| || ||||||||||| | |||||||||| ||||| || || |||||||||||||||
Sbjct: 3223 catgagaccaaccaattagctgtagggttgacagatggctccgttaaggtgatggaaccc 3282
Query: 1940 acagaatcggaaggaaaatggggaacaactccacctgtagataatggtgtgctaaatggg 1999
| || ||| || |||||||||||||||| ||| || || ||||| || | || |||||
Sbjct: 3283 aaagcatcagatggaaaatggggaacaagtccgccggtggataacgggatactcaatggc 3342
Query: 2000 aggacgacatcatcatccactacaagcaaccacacgccggatcagttacagaga 2053
|||||||| ||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 3343 aggacgacctcatcatccactacaagtaaccacacaccagatcagttacagaga 3396
>30073.m002232 conserved hypothetical protein
Length = 3414
Score = 139 bits (70), Expect = 8e-32
Identities = 145/170 (85%)
Strand = Plus / Plus
Query: 1238 aacatgatgacgttcaaggtaatgacaacattcatgtctcctcctcctgcttcaactttc 1297
|||||||||||||||||||| ||||||||||| ||||| || ||||||||| | || ||
Sbjct: 2602 aacatgatgacgttcaaggtcatgacaacatttatgtccccgcctcctgctgcgacattt 2661
Query: 1298 ctagcattccatcctcaggataataatataattgccatcggaatggaggattcagctatc 1357
||||||| |||||||||||||||||||| |||||||| || ||||||||||| | |
Sbjct: 2662 ttagcatttcatcctcaggataataatattattgccattggcatggaggattcttcagtg 2721
Query: 1358 cacatttataatgttagagtggatgaggtgaaatcaaaattgaggggtca 1407
|| ||||||||||| ||||| |||||||| ||| ||||| ||| ||||||
Sbjct: 2722 caaatttataatgtcagagttgatgaggtcaaaacaaaactgaagggtca 2771
Score = 77.8 bits (39), Expect = 2e-13
Identities = 287/369 (77%), Gaps = 3/369 (0%)
Strand = Plus / Plus
Query: 20 ggtgttaatgacttggcttttgctcatccaaacaaacaactgtgtgttgtaacctgtgga 79
|||||||||||| | || ||||||||||| ||||| ||||||||| |||| || |||||
Sbjct: 1366 ggtgttaatgacattgcatttgctcatcccaacaagcaactgtgtattgtgacatgtggt 1425
Query: 80 gatgataagctaataaaggtttggga---tttagggggacggaaattatttaattttgaa 136
||||| ||| | || ||||||||||| | ||| ||||| | | | || ||||||
Sbjct: 1426 gatgacaagatgattaaggtttgggatgctgtagctggacgaagacagtatacatttgaa 1485
Query: 137 ggtcacgaggctccagtttattctatatgtcctcaccataaagaaagcattcagtttata 196
||||| || ||||| || |||||| | || ||||| | ||||||| || ||||| |||
Sbjct: 1486 ggtcatgaagctcctgtgtattctgtctgccctcattacaaagaaaatatccagttcata 1545
Query: 197 ttcgcaactgctattgatggaaagataaaggcctggctatatgataatgtgggacctaga 256
|| | ||||| |||||||| ||||| || || |||||||||||| | ||||| |||||
Sbjct: 1546 ttttctactgcaattgatgggaagattaaagcttggctatatgattctttgggatctaga 1605
Query: 257 gttgattatgatgcaccaggccgctggtgcactacaatgctttacagtgctgatggtagt 316
|| ||||||||||| || || | ||||| || | ||| || || || ||||| |||
Sbjct: 1606 gtagattatgatgctcctggactttggtgtaccatgatggcatatagcgcagatggcagt 1665
Query: 317 agattattctcttgtggaacaagtaaagagggggattctttcctagttgaatggaacgaa 376
|| | ||||| ||||||||||||||||| || || ||| |||||||| ||||| |||
Sbjct: 1666 aggcttttctcgtgtggaacaagtaaagaaggtgaatctcatctagttgagtggaatgaa 1725
Query: 377 agtgaagga 385
|||||||||
Sbjct: 1726 agtgaagga 1734
Score = 56.0 bits (28), Expect = 9e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 488 cagataaagttttgggatatggataataccaa 519
||||| ||||||||||||||||||||||||||
Sbjct: 1834 cagattaagttttgggatatggataataccaa 1865
>29927.m000603 WD-repeat protein, putative
Length = 3405
Score = 111 bits (56), Expect = 2e-23
Identities = 206/256 (80%)
Strand = Plus / Plus
Query: 130 ttttgaaggtcacgaggctccagtttattctatatgtcctcaccataaagaaagcattca 189
|||||| ||||| || || || || |||||| | ||||| || || || ||||| |||||
Sbjct: 1500 ttttgagggtcatgaagcacctgtatattctgtgtgtccacatcacaaggaaagtattca 1559
Query: 190 gtttatattcgcaactgctattgatggaaagataaaggcctggctatatgataatgtggg 249
|||||| || |||| |||| |||||||||||||||||| ||| | |||||||| ||||
Sbjct: 1560 gtttatcttttcaacggctactgatggaaagataaaggcatggttgtatgataacctggg 1619
Query: 250 acctagagttgattatgatgcaccaggccgctggtgcactacaatgctttacagtgctga 309
| |||||||||| ||||||||||| |||| || | || |||||| || ||||||||
Sbjct: 1620 atctagagttgactatgatgcacctggccactcatctaccacaatggcatatagtgctga 1679
Query: 310 tggtagtagattattctcttgtggaacaagtaaagagggggattctttcctagttgaatg 369
||| | || |||||||| ||||| |||| ||||||||| || || |||||| |||||
Sbjct: 1680 tggaacaaggttattctcatgtgggacaaataaagagggagaatcacacctagtggaatg 1739
Query: 370 gaacgaaagtgaagga 385
||| ||||||||||||
Sbjct: 1740 gaatgaaagtgaagga 1755
Score = 111 bits (56), Expect = 2e-23
Identities = 191/236 (80%)
Strand = Plus / Plus
Query: 1184 tcaaagaatgactcatatgtaatgtctgctgctggaggaaaggtttcactgtttaacatg 1243
|||||||||||||| ||||| ||||| ||| |||| || || | || || || || |||
Sbjct: 2554 tcaaagaatgactcttatgttatgtcagcttctggggggaaaatctctctcttcaatatg 2613
Query: 1244 atgacgttcaaggtaatgacaacattcatgtctcctcctcctgcttcaactttcctagca 1303
||||| || ||| |||||| ||||||||| | || || || ||| |||| || || ||
Sbjct: 2614 atgacatttaagacaatgaccacattcatgcccccaccaccagctgcaacatttctggct 2673
Query: 1304 ttccatcctcaggataataatataattgccatcggaatggaggattcagctatccacatt 1363
|| ||||||||||| |||||||| ||||| || ||||||||||||||| ||||||| ||
Sbjct: 2674 tttcatcctcaggacaataatatcattgctattggaatggaggattcatctatccaaatc 2733
Query: 1364 tataatgttagagtggatgaggtgaaatcaaaattgaggggtcatcagaagagaat 1419
||||||||| | ||||||||||| ||| |||| || | ||||||||||| |||||
Sbjct: 2734 tataatgttcgcgtggatgaggttaaaacaaagttaaaaggtcatcagaaaagaat 2789
>29841.m002924 WD-repeat protein, putative
Length = 3348
Score = 77.8 bits (39), Expect = 2e-13
Identities = 201/255 (78%)
Strand = Plus / Plus
Query: 130 ttttgaaggtcacgaggctccagtttattctatatgtcctcaccataaagaaagcattca 189
||||||||| || || ||||| ||||| ||| | || |||||| |||| |||| ||||||
Sbjct: 1446 ttttgaaggccatgaagctcctgtttactctgtctgccctcactataaggaaaacattca 1505
Query: 190 gtttatattcgcaactgctattgatggaaagataaaggcctggctatatgataatgtggg 249
||||||||| |||| || | |||||||||||||| || ||| | ||||| || | ||
Sbjct: 1506 gtttatattttcaacagcactagatggaaagataaaagcatggttgtatgacaacctagg 1565
Query: 250 acctagagttgattatgatgcaccaggccgctggtgcactacaatgctttacagtgctga 309
| | ||||||||||||| || || || ||||||||||| || ||| ||| ||||||||
Sbjct: 1566 atcacgagttgattatgaggctcctggtcgctggtgcacaactatggcttatagtgctga 1625
Query: 310 tggtagtagattattctcttgtggaacaagtaaagagggggattctttcctagttgaatg 369
||||| || |||| || || || ||||||||||| ||||| || | ||||||||
Sbjct: 1626 tggtacaaggctattttcatgcgggacaagtaaagatggggagtcacatattgttgaatg 1685
Query: 370 gaacgaaagtgaagg 384
||| |||||||||||
Sbjct: 1686 gaatgaaagtgaagg 1700
Score = 58.0 bits (29), Expect = 2e-07
Identities = 155/197 (78%)
Strand = Plus / Plus
Query: 1190 aatgactcatatgtaatgtctgctgctggaggaaaggtttcactgtttaacatgatgacg 1249
||||| || ||||| ||||| || ||||||||||| |||| || || || ||||||||
Sbjct: 2491 aatgattcctatgtcatgtcagcatctggaggaaagatttcccttttcaatatgatgaca 2550
Query: 1250 ttcaaggtaatgacaacattcatgtctcctcctcctgcttcaactttcctagcattccat 1309
|| ||| ||||||||| |||||| | || || || || |||| || || ||||| |||
Sbjct: 2551 tttaagacaatgacaactttcatgccgccaccaccagcagcaacatttctcgcatttcat 2610
Query: 1310 cctcaggataataatataattgccatcggaatggaggattcagctatccacatttataat 1369
||||| |||||||| || ||||| || || ||||| ||||| | || || |||||||||
Sbjct: 2611 cctcaagataataacattattgctattggcatggatgattccacaattcagatttataat 2670
Query: 1370 gttagagtggatgaggt 1386
||| | || ||||||||
Sbjct: 2671 gttcgggtagatgaggt 2687