Jatropha Genome Database
- JcCA0020472.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0020472.10 - phase: 1 /pseudo/partial
(1319 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008877 kinesin heavy chain, putative 733 0.0
29986.m001666 kinesin heavy chain, putative 210 2e-53
>30128.m008877 kinesin heavy chain, putative
Length = 3156
Score = 733 bits (370), Expect = 0.0
Identities = 894/1066 (83%), Gaps = 17/1066 (1%)
Strand = Plus / Plus
Query: 68 cagctgcctgacagttcatgttctaggaagaaacctcacgtccggaactgtgctccgtgg 127
||||||| ||||||||||||||| ||||||| |||| || || |||||| | | || ||
Sbjct: 1884 cagctgcttgacagttcatgttcaaggaagagacctaacatctggaactataattcgagg 1943
Query: 128 ttctatgcatctggttgatttagcaggaagtgaacgagtcgacaaatcagaggtcactgg 187
||||||||| ||||||| || |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 1944 ttctatgcacttggttgacttggcaggaagtgaacgtgtcgacaaatctgaggtgactgg 2003
Query: 188 agatagattaaaggaagcacagcatatcaacaaatctctttctgctttaggagatgtgat 247
||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 2004 agacagattgaaggaagcacagcatatcaacaaatctctttctgctctaggagatgtcat 2063
Query: 248 ttcttctcttgctcagaaaagttctcatgttccatatagaaacagtaaactcacacaact 307
| | ||||||||||| || |||||||||||||| || || ||||||||||||||||||||
Sbjct: 2064 tgcatctcttgctcaaaagagttctcatgttccctacaggaacagtaaactcacacaact 2123
Query: 308 actccaagattcacttggagggcaagcaaagacacttatgtttgtccacataagtcctga 367
||| |||||||||||||||||||| || ||||| || |||||||||||||||||||||||
Sbjct: 2124 acttcaagattcacttggagggcaggccaagactctcatgtttgtccacataagtcctga 2183
Query: 368 gcatgaagctcttggagaaacgcttagcacactaaaatttgctgaacgggtcgccacagt 427
||||||| |||||||||| |||| ||||| || |||||||||||||| || |||||
Sbjct: 2184 aagtgaagctgttggagaaacaattagtacacttaagtttgctgaacgggttgctacagt 2243
Query: 428 tgagcttggtgctgctcgagttaataaagatagtggtgaagtgaaggagctaaaagagca 487
|||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2244 tgagcttggtgctgctaaagttaataaagatagtgctgaagtgaaggagctaaaagagca 2303
Query: 488 gattgctagtcttaaagcagccttagctaggaaggatggagattctg---aatgttcgca 544
| |||||| ||||| ||||||||||| |||||||| | |||||| | | ||| ||
Sbjct: 2304 ggttgctaaccttaaggcagccttagcaaggaaggacgcagattcagagcagcattcaca 2363
Query: 545 acaatctcgatccagcaccccagaaagatatagaatgaaactgggtagacattctggttc 604
|| |||||||| ||||||||||||||| ||||| |||| ||||| |||||||||||||
Sbjct: 2364 gcattctcgatctagcaccccagaaagacatagactgaagttgggtggacattctggttc 2423
Query: 605 tcaacacagttggcatggag---------atagtagtcgcaggcaatcaatggatagtgc 655
|||||| |||||||| || | ||| ||||||||||||||| |||| | |||
Sbjct: 2424 tcaacatagttggcacggtgttgaagataataatagtcgcaggcaatcgctggacaatgc 2483
Query: 656 cggtaatacagaggatg-ggagcgactcttcatctcacctaagaggacgaagcttggatc 714
||||| |||| |||| ||||| |||||| ||| | |||| |||||||||||||||
Sbjct: 2484 tagtaatccaga-gatgaggagcaactctttatccatcacaagaagacgaagcttggatc 2542
Query: 715 tccaagatttgcaaatgaattcgcctacctggccagctgtttgcggtcttgcacagaatg 774
|| | ||||||| || |||||||||| | ||||| |||| || || |||||||||||
Sbjct: 2543 tcaatgatttgcgaacgaattcgcctccttggccgcctgtcggcattcctgcacagaatg 2602
Query: 775 gaaaggaggatgataaagaatcagcttctggtgattgggttgataagattatggtgaata 834
||||||| ||||| ||||||||||| |||| ||| ||||| || ||| | |||||||| |
Sbjct: 2603 gaaaggaagatgacaaagaatcagcctctgatgactgggtagacaaggtgatggtgaaca 2662
Query: 835 ggcatgacaatgtaagttcagatgaaaaccttctaggacaatgggaactagacagtagac 894
||| ||||||||||||| ||| |||||||| || |||||||||||||||||||||||||
Sbjct: 2663 ggcttgacaatgtaagtggagaagaaaacctgctgggacaatgggaactagacagtagac 2722
Query: 895 aattgcctgagccattctacgaaggctatattcgagacccttcaaagatttacccagaac 954
|||||||||| ||||| || | || ||| ||| ||||||||||||||||||||| ||||
Sbjct: 2723 aattgcctgaaccattttatcagggatatgttccagacccttcaaagatttaccctgaac 2782
Query: 955 aaccatacagtactaaatct---tctcggataaacaataaagacaaccaagaatatgatg 1011
||| || | || ||| | | || | ||| ||||| |||| ||||||||||||||
Sbjct: 2783 aactctataataataataataaatgtcctacaaagaataaggacagccaagaatatgatg 2842
Query: 1012 tacagagtcgtaggtccgatgttctctctactgatggttctgaagaacttgaagctggta 1071
||||||||| ||| ||||||| | |||||||| ||||||||||| ||||| ||||| |
Sbjct: 2843 cacagagtcgccggttcgatgttatatctactgacggttctgaagagcttgatgctggaa 2902
Query: 1072 caagtgattcttctgagcctgacttgctatggcaatctaatcttcc 1117
| ||||||||||||||||| |||||| | ||||||||||| |||||
Sbjct: 2903 ctagtgattcttctgagccagacttgttgtggcaatctaaccttcc 2948
>29986.m001666 kinesin heavy chain, putative
Length = 3039
Score = 210 bits (106), Expect = 2e-53
Identities = 313/382 (81%)
Strand = Plus / Plus
Query: 76 tgacagttcatgttctaggaagaaacctcacgtccggaactgtgctccgtggttctatgc 135
|||| |||||||||| ||||||| || | || || |||||| | || || |||| |||||
Sbjct: 1811 tgactgttcatgttcaaggaagagacttgacatctggaactctacttcggggttgtatgc 1870
Query: 136 atctggttgatttagcaggaagtgaacgagtcgacaaatcagaggtcactggagatagat 195
|| |||||||||| || || ||||| ||||||||||||| || || ||||||||||||
Sbjct: 1871 atttggttgatttggcggggagtgagagagtcgacaaatctgaagtgactggagatagac 1930
Query: 196 taaaggaagcacagcatatcaacaaatctctttctgctttaggagatgtgatttcttctc 255
|||| || ||||| ||||| ||||||||||| || |||||||| ||||| ||| |||| |
Sbjct: 1931 taaaagaggcacaacatattaacaaatctctctcagctttaggtgatgtcattgcttcac 1990
Query: 256 ttgctcagaaaagttctcatgttccatatagaaacagtaaactcacacaactactccaag 315
||||||| || | | | ||||| ||||| |||| || || |||||||| || |||||||
Sbjct: 1991 ttgctcaaaagaatccacatgtgccataccgaaatagcaagctcacacagctgctccaag 2050
Query: 316 attcacttggagggcaagcaaagacacttatgtttgtccacataagtcctgagcatgaag 375
|||||||||||||||| || |||||| | |||||||| |||||||| ||||||| ||| |
Sbjct: 2051 attcacttggagggcaggccaagacattaatgtttgttcacataagccctgagcctgatg 2110
Query: 376 ctcttggagaaacgcttagcacactaaaatttgctgaacgggtcgccacagttgagcttg 435
|| |||||||||| | || || || |||||||||||||| || || || ||||| || |
Sbjct: 2111 ctattggagaaacaataagtacgcttaaatttgctgaacgagtagcgactgttgaactag 2170
Query: 436 gtgctgctcgagttaataaaga 457
||||||| ||||| || |||||
Sbjct: 2171 gtgctgcccgagtgaacaaaga 2192