Jatropha Genome Database
- JcCA0020001.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0020001.20 - phase: 0
(1413 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29842.m003632 tryptophan synthase beta chain, putative 634 0.0
29666.m001491 tryptophan synthase beta chain, putative 62 1e-08
>29842.m003632 tryptophan synthase beta chain, putative
Length = 1392
Score = 634 bits (320), Expect = 0.0
Identities = 950/1160 (81%)
Strand = Plus / Plus
Query: 220 ggaaaatttggaaggttcggaggcaactacgtgcccgaaattctcgttgcatgcttgaga 279
||||||||||| ||||| |||||||| | |||||| || | |||| || | ||||||||
Sbjct: 220 ggaaaatttgggaggtttggaggcaagttcgtgcctgagactctcattacgtgcttgagg 279
Query: 280 gagcttgaaactcaattcatttctgctttacgggaccctctgtttcaggaggagctagct 339
|| |||||| || ||||| ||||| |||| |||||| |||||||||||||| ||
Sbjct: 280 gatcttgaagctgtattcaattctgttttaaaagaccctgaatttcaggaggagcttgcg 339
Query: 340 acagcactaagagactatgtaggaagagagactcccttatattttgcagagcggcttacg 399
||||||||||||||||| || || || |||||||| | |||| |||||| |||| |||
Sbjct: 340 acagcactaagagactacgtggggagggagactccgctgtattacgcagagaggctcacg 399
Query: 400 aatcactacaagaaagaagacggaaaaggaccagaaatttacttgaaaagagaagatctc 459
|||||||||||||| ||| | ||| ||||||| |||||||||||||| |||||||||||
Sbjct: 400 aatcactacaagaatgaaaaaggagaaggacctgaaatttacttgaagagagaagatctt 459
Query: 460 aaccattgtggtgcacacaagatgaataacgcgattgcacaagctatgattgccaaacgc 519
|||||| || || || || |||| ||||| ||||| || || ||||||||||||||
Sbjct: 460 aaccatacaggagctcataaattgaacaacgcaattgctcaggcgatgattgccaaacgt 519
Query: 520 atgggattgaaaagtgtcgtggcggccaccggtgctggacaacatggcgttgctactgct 579
||||| || ||| ||| ||||||||||| ||||| || |||||||||||||| ||||||
Sbjct: 520 atgggcatggaaactgttgtggcggccactggtgccggtcaacatggcgttgcgactgct 579
Query: 580 gctgcttgtgctaagctttcattagagtgtaccgttcttatgggcaccacggacatggaa 639
||||| |||||||||||||| || ||||||| ||| | ||||| || |||| ||||||
Sbjct: 580 gctgcatgtgctaagctttctttgcagtgtactgttttcatgggtacttcggatatggaa 639
Query: 640 aagcaatcctctaacgtactcttgatgaaactattaggagctcaggttaaagctgtaaat 699
| ||||||||| ||||||||| |||||||||| || || ||| |||||||||| ||
Sbjct: 640 aggcaatcctcaaacgtactcctgatgaaacttttgggcgctgaggttaaagcagtggca 699
Query: 700 ggaaatttcaaagatgcgagctcagaagcagtaagagaatgggtaggcaatttagagaca 759
|||||||| || ||||| |||||||||||| |||||||||||||||| |||||| ||||
Sbjct: 700 ggaaattttaaggatgcaagctcagaagcaataagagaatgggtagggaatttacagacg 759
Query: 760 agctattacttgtcagggacagccgtggggcctcatccatgtccaactatggtacggcag 819
||||| |||||| ||||||| | ||||| ||||||||| |||||| ||||| ||| ||
Sbjct: 760 agctactacttggcagggactgtagtgggtcctcatccaagtccaagcatggtccgggag 819
Query: 820 tttcagtcggtgataggaaaagagataaggaaacaagcaatggagaaatggggtgggaag 879
|||||||| || |||||||| || | ||| | |||||||||||||||||||||||||||
Sbjct: 820 tttcagtctgtaataggaaaggaaacaagaaggcaagcaatggagaaatggggtgggaag 879
Query: 880 ccagatgtgcttatcgcctgcgtaggaagcggatcaaatgcattgggagctttctacgag 939
|||||||| || | || || ||||| || || ||||||||||| || ||| ||||
Sbjct: 880 ccagatgtactggtagcatgtgtagggagtgggtcaaatgcattagggttgttcaacgaa 939
Query: 940 ttcatagaagatgaagatgtaaggttgattggagttgaagctgctggatttggtctggat 999
||||||| |||||||||||| || ||||| || ||||| ||||||||||||||| | |
Sbjct: 940 ttcataggagatgaagatgtgagattgataggtgttgaggctgctggatttggtttaaac 999
Query: 1000 agtggaaaacacgctgctacccttgctatgggagacgtgggtgtctaccatggagccatg 1059
||||| |||||||| || || | |||| ||||| |||||||| || |||||||| |||
Sbjct: 1000 agtgggaaacacgcagcaactttagctaaaggagaagtgggtgtgtatcatggagctatg 1059
Query: 1060 agctatttgctgcaagatgaagaaggacagatactaggaccacattctattggtgtaggg 1119
|| |||||| |||||||||| ||||| || || |||| ||| |||||||||| || |||
Sbjct: 1060 agttatttgttgcaagatgaggaaggtcaaattataggtccatattctattggcgtgggg 1119
Query: 1120 ttggaatatccaggagttagcccagaactaagcttgcttaaagaaacaaaacgggcagag 1179
|||||||||||||||||||| |||||| | ||||| |||||||||| | |||| || ||
Sbjct: 1120 ttggaatatccaggagttagtccagaattgagcttccttaaagaaatagaacgtgcggaa 1179
Query: 1180 ttttattctgctacagataaggaggctgtagaagcattcaaaagactgtgcaagttagag 1239
|||||||||||||| || | || ||| || | |||| | | || ||||| || || ||
Sbjct: 1180 ttttattctgctaccgacgaagaagctataaatgcataccagaggctgtgtaaattggaa 1239
Query: 1240 ggtataattccagctttggaggcgtctcatgcattggcatttctggagaaactgtgtcct 1299
||||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||
Sbjct: 1240 ggtataattccagctttggaggcttctcatgcactcgcatttctggagaaactttgtcct 1299
Query: 1300 actttacccagtggcattaagattatagtaaattgtagcggcgttggagataaagatgct 1359
| |||| ||| ||||| || | || || | |||||||| ||| ||||||||||||
Sbjct: 1300 aatttatccaatggcaccaaagtcattgtcagctgtagcggtcgtggggataaagatgct 1359
Query: 1360 gcgacagtcttaaactacaa 1379
|| |||||||||||||||||
Sbjct: 1360 gccacagtcttaaactacaa 1379
>29666.m001491 tryptophan synthase beta chain, putative
Length = 1185
Score = 61.9 bits (31), Expect = 1e-08
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 853 caagcaatggagaaatggggtgggaagccagatgt 887
||||||||||| |||||||||||||||||||||||
Sbjct: 892 caagcaatggaaaaatggggtgggaagccagatgt 926