Jatropha Genome Database
- JcCA0020001.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0020001.10 + phase: 0 /pseudo/partial
(2016 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29842.m003631 conserved hypothetical protein 650 0.0
>29842.m003631 conserved hypothetical protein
Length = 3072
Score = 650 bits (328), Expect = 0.0
Identities = 570/650 (87%), Gaps = 3/650 (0%)
Strand = Plus / Plus
Query: 1274 tccctcaaaatgttggtccagtcgcccctaaccaaccaccaggcagtgctttttcgggct 1333
||||||| |||| ||||||||| ||| ||||||||||| | ||| |||||||||| ||
Sbjct: 2363 tccctcagaatgctggtccagttgcctctaaccaaccagcgggcggtgctttttcaggtc 2422
Query: 1334 tgattggttccctcatggctcaaggtttaatctcattgacaaaacaaactcctggacagg 1393
||||| ||| || ||||||||||||| || ||||| ||| ||||| |||| |||||
Sbjct: 2423 tgattaattctctggtggctcaaggtttgatatcatt---aaagcaaacacctgtacagg 2479
Query: 1394 attctgtcggactcgagttcaatgctgatcttattaaggtgcgccatgagtctgcaataa 1453
||||||| || ||||||||||||||||| ||| |||||||||| |||||||||||||| |
Sbjct: 2480 attctgtggggctcgagttcaatgctgaccttcttaaggtgcggcatgagtctgcaatta 2539
Query: 1454 gtgctttatatgcagatctccccagacagtgcacaacatgtggccttagatttaagtgtc 1513
| || || ||||| |||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 2540 gcgccttgtatgctgatctccctcggcagtgcacaacatgtggccttagatttaagtgtc 2599
Query: 1514 aagaagagcacagtagccacatggattggcatgtcactaagaaccggatgtccaagaacc 1573
||||||| || || || ||||||||||||||||| |||| |||||| ||||| |||||||
Sbjct: 2600 aagaagatcatagcagtcacatggattggcatgttactaggaaccgaatgtctaagaacc 2659
Query: 1574 ggaagcacaaaccttctcgcaagtggttcgttgatacaagtatgtggctcagtggggcag 1633
| || || |||||||||||||||||||| ||| | ||| |||||||||||| ||||| |
Sbjct: 2660 gtaaacagaaaccttctcgcaagtggtttgttagtgcaactatgtggctcagaggggctg 2719
Query: 1634 aggcattaggaactgatgcagttcctggatttttgcctactgagtctgtcgtggagaaga 1693
||||||| |||||||||||||||||||| ||||| ||||||||| |||| ||||||||||
Sbjct: 2720 aggcattgggaactgatgcagttcctggttttttacctactgaggctgttgtggagaaga 2779
Query: 1694 aggatgacgaagaaatggctgttcctgctgatgaggagcagaatgcttgtgcattatgtg 1753
||||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 2780 aggatgatgaagagatggctgttcctgctgatgaagagcagaatgcatgcgcattatgtg 2839
Query: 1754 gagagccttttgatgatttctacagcgatgaaacagaggaatggatgtacaaaggagctg 1813
||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||| ||||
Sbjct: 2840 gagagccttttgatgatttttacagtgatgaaactgaggaatggatgtataaaggggctg 2899
Query: 1814 tctacatgaatgcgcccaatggatcaacagcaggcatggagaggtcccagttaggtccta 1873
|||| ||||||| |||| ||| |||||||| ||||||| ||||||||||| || ||||
Sbjct: 2900 tctatctgaatgcacccagtgggtcaacagcgagcatggataggtcccagttgggcccta 2959
Query: 1874 tagtacatgctaaatgcaggtctgagtctagtgtggctccacctgaagat 1923
|||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2960 tagtacatgctaaatgcaggtcagagtctagtgtggctccacctgaagat 3009
Score = 351 bits (177), Expect = 1e-95
Identities = 440/527 (83%), Gaps = 3/527 (0%)
Strand = Plus / Plus
Query: 3 aattctcctagaaggtttgttgagggggcttcaccatctcatcctctgtttgattatggg 62
||||||||| |||||||| ||||||||||||| |||||||||||| | || |||| |||
Sbjct: 988 aattctcctcgaaggtttcttgagggggcttctccatctcatcctgttttagattgtgga 1047
Query: 63 cccagtagacccattgccagagatgaagaaacaactgattggagacgaaaacactattct 122
|| |||| |||| | |||||||||||| |||| ||| |||||| | ||||||||||||
Sbjct: 1048 cctcttagatccatgggcagagatgaagagacaaatgaatggagaaggaaacactattct 1107
Query: 123 gatgatatccaaaaccgattggaaacttctgttgcatatagcctttccaatggacatgag 182
||||||| ||| || ||| ||| | ||| |||| |||| ||||| |||||||||||
Sbjct: 1108 gatgataaccataagaaatttgaagcctctattgcgtataatctttctaatggacatgaa 1167
Query: 183 catcaaggacctagggctttgatagatgcatatggagaagacaaacggagtagagtttca 242
|||||||| || || ||||| |||||||| ||||||||||||||| ||| ||| || ||
Sbjct: 1168 catcaagggcccagagctttaatagatgcctatggagaagacaaaaggaaaagaattcca 1227
Query: 243 aatagcaaacctttgcaaattgatcgcttagatgtagatggcatggtcaataaagtggct 302
|||||||||| |||||||||||| ||||||||||||||||||| | ||||||||||| |
Sbjct: 1228 aatagcaaacatttgcaaattgaacgcttagatgtagatggcacagccaataaagtgggt 1287
Query: 303 ccaaggttatggcagaatactgaagaggaggaatttgattgggaagatatgagccctaca 362
||||| | |||||| |||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 1288 ccaagatcatggcaaaatactgaagaggaggaattcgactgggaagatatgagtcctact 1347
Query: 363 ttagcagaccgcaataggagcaatgatttcttatcatcatctgttccgccttttggaggg 422
||| ||| |||| |||||||||| ||| || || ||||||||| ||||||||||||
Sbjct: 1348 ttaatagatcgcagcaggagcaatggtttgtt---attatctgttccaccttttggaggg 1404
Query: 423 gtggggactaggcctgggtttggaacaagaggtccttcccagttggattctgatattagg 482
| ||| |||| ||||| ||||||||||||| | |||||| ||||| |||||| |||||
Sbjct: 1405 gctggggctagacctggctttggaacaagagctgcttcccgattggactctgatcttagg 1464
Query: 483 agcaaccgatctgctcaggctcagctatcattgatagatgattcctc 529
||||| | ||||| |||||||||||| || || ||||||| |||||
Sbjct: 1465 agcaaacaatctggtcaggctcagctgccactggtagatgactcctc 1511
Score = 319 bits (161), Expect = 4e-86
Identities = 380/453 (83%)
Strand = Plus / Plus
Query: 568 aatgctaaaggaagaaatcgagaattccggatgccattttctagaagtgttatatcctct 627
||||| |||||||||||| | || || | |||||| |||||| |||||| ||||||||||
Sbjct: 1672 aatgccaaaggaagaaatagggatttacagatgcccttttctggaagtggtatatcctct 1731
Query: 628 tcagtcagtgatagtttggctcctcttgttgacaaacttcctgacactgatggtcagtat 687
|||| ||||| | ||||||| ||||||||||| ||||||| || |||||| ||| |
Sbjct: 1732 tcaggaagtgagattttggcttctcttgttgaccaacttccagatgctgatgctcaaatt 1791
Query: 688 gttaggcctccaactctcccctcgagagtgggttctagtattgcaccatcaacagcagga 747
| |||||||||||||| || || ||| || | ||||||| ||||| |||| || |||||
Sbjct: 1792 atcaggcctccaactcttccatcaagaatgagctctagtactgcactatcatcaacagga 1851
Query: 748 gtatggcctcttgtaaatgtgcataaatctcatccacctcctgtgcacccaattttccca 807
|||||||| ||||||||||||||||||||||| | ||||||| ||| ||| |||||||||
Sbjct: 1852 gtatggccacttgtaaatgtgcataaatctcaccaacctcctttgcgccctattttccca 1911
Query: 808 ccacaaaagcagagtagaagtcagtttgattcaacaaatgcaagaaatactgttgtaaat 867
||||| | |||||||||||||| | ||||| | | |||||| || ||||||| |||||||
Sbjct: 1912 ccacagatgcagagtagaagtctgcttgatcctagaaatgctagtaatactgctgtaaat 1971
Query: 868 cagggtttacagcagtctaccttttcatctgagcaacagttcaatggttttgaaagcatg 927
|||||||| ||| ||||| |||||| |||||||||||||| |||||| |||||||||
Sbjct: 1972 cagggttttcagaagtcttcctttttgtctgagcaacagttgaatggtcttgaaagcaaa 2031
Query: 928 gagcccagtttgacgaagcaaccactgttacccagtcggcatgccaccctaaatcagcaa 987
|| | ||||||||| ||||| ||||| ||||| |||| ||||| || | |||||||||
Sbjct: 2032 gaacacagtttgacaaagcagccactattaccaagtcaacatgctgccatgaatcagcaa 2091
Query: 988 aaccaggctcaagttaatcattttcagccacag 1020
||||||| ||||||||||| |||||||||||||
Sbjct: 2092 aaccagggtcaagttaatccttttcagccacag 2124