Jatropha Genome Database

JcCA0019191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0019191.10 + phase: 1 /partial
         (326 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27613.m000621 Calcium-binding protein, putative                       327   2e-89
29964.m000157 Calcium-binding protein, putative                       115   2e-25

>27613.m000621 Calcium-binding protein, putative
          Length = 1026

 Score =  327 bits (165), Expect = 2e-89
 Identities = 261/293 (89%)
 Strand = Plus / Plus

                                                                        
Query: 24   cttgatcgttcaaatactgcagtcatggttcgatatgtaagctccaaagataacttgagg 83
            |||||| | |||||| ||||| ||||||| | |||||| ||||| |||||||||||| ||
Sbjct: 721  cttgatagatcaaattctgcaatcatggtacaatatgttagctcaaaagataacttgcgg 780

                                                                        
Query: 84   attctaatgaatcttctaagggaatcaagcaagaacatccagattgatgcatttcatgtg 143
            ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| || 
Sbjct: 781  attctgatgaatcttctaagggaatcaagcaagaacatcaagatagatgcatttcacgtc 840

                                                                        
Query: 144  ttcaagctttttgctgcgaatcaaaataaacctcctgaaattgttggcatcctcattgcc 203
            |||||||| |||||||| ||||||||||||||||||||||||||  |||| || ||||||
Sbjct: 841  ttcaagctatttgctgccaatcaaaataaacctcctgaaattgtcagcatacttattgcc 900

                                                                        
Query: 204  aatagaagcaagcttctgcgtttcttggccgacttcaagatggatagagaagatgagcaa 263
            ||||| ||||| ||||||||||||||||| ||||| ||  ||||||||||||||||||||
Sbjct: 901  aataggagcaaacttctgcgtttcttggcagactttaaactggatagagaagatgagcaa 960

                                                                 
Query: 264  tttgaggaagataaaactctggtgataaaagaaattgcttcattaaaacaagc 316
            ||||||||||||||||||| ||| || ||||||||||||  ||| ||||||||
Sbjct: 961  tttgaggaagataaaactcaggttatcaaagaaattgctgaattgaaacaagc 1013


>29964.m000157 Calcium-binding protein, putative
          Length = 1338

 Score =  115 bits (58), Expect = 2e-25
 Identities = 124/146 (84%)
 Strand = Plus / Plus

                                                                        
Query: 72   gataacttgaggattctaatgaatcttctaagggaatcaagcaagaacatccagattgat 131
            ||||||||||||||||| |||||||| || || |||||||| |||| |||||| || || 
Sbjct: 1081 gataacttgaggattctcatgaatctccttagagaatcaagtaagagcatccaaatagaa 1140

                                                                        
Query: 132  gcatttcatgtgttcaagctttttgctgcgaatcaaaataaacctcctgaaattgttggc 191
            ||||||||||| || ||||| || ||||| ||||||||||||||| |||| ||| |  ||
Sbjct: 1141 gcatttcatgtttttaagctcttcgctgctaatcaaaataaacctgctgacattatcagc 1200

                                      
Query: 192  atcctcattgccaatagaagcaagct 217
            || ||  |||||||||||||||||||
Sbjct: 1201 atactggttgccaatagaagcaagct 1226