Jatropha Genome Database
- JcCA0015901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0015901.10 + phase: 2 /partial
(1759 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29680.m001661 hypothetical protein 410 e-113
29883.m002016 hypothetical protein 135 1e-30
30147.m014034 hypothetical protein 86 8e-16
27451.m000241 conserved hypothetical protein 78 2e-13
>29680.m001661 hypothetical protein
Length = 3489
Score = 410 bits (207), Expect = e-113
Identities = 348/395 (88%)
Strand = Plus / Plus
Query: 845 agtccaaaactgtctataaatagtgatgaattgaagaatcccgatgcttctagtgctata 904
|||||||| ||||||| ||| |||||||||||||||||| |||||||||||| | |||
Sbjct: 2287 agtccaaagttgtctattaatggtgatgaattgaagaatcttgatgcttctagttccata 2346
Query: 905 ggaatgcagatacttcaaaagagaatctctcttgagagaaatgaatctggtctatctttg 964
||||| || || ||||||||||||||||| ||||| |||||||| |||||||||||| ||
Sbjct: 2347 ggaatacaaatgcttcaaaagagaatctcacttgacagaaatgagtctggtctatctctg 2406
Query: 965 gatggaagtattgtcagtgaaattgagggagaaactgtggttgatagactgaataggcag 1024
||||||||||| |||||||||||||| || |||| || |||||| | |||| ||||||
Sbjct: 2407 gatggaagtatagtcagtgaaattgaaggtgaaagtgcagttgatcggttgaagaggcag 2466
Query: 1025 attgagcatgataaaaaattgttaattgctttgtacaaggaattggaagaagaaagaaat 1084
|||||||||||||| ||| |||||| |||||| |||||||||||||| ||||||||||||
Sbjct: 2467 attgagcatgataagaaactgttaagtgctttatacaaggaattggatgaagaaagaaat 2526
Query: 1085 gcatctgcaattgctgcaaatcaagcaatggccatgattactagattgcaggaagagaag 1144
|||| |||||| |||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 2527 tcatcagcaatttctgcaaatcaagcaatggccatgattactagactgcaggaagaaaag 2586
Query: 1145 gcaacactccaaatggaagccttgcagtgcctgagaatgatggaagaacaagctgaatat 1204
|||||||| ||||||||||||||||| | ||| |||||||||||||| ||||| || |||
Sbjct: 2587 gcaacacttcaaatggaagccttgcaatacctaagaatgatggaagagcaagccgagtat 2646
Query: 1205 gacatggaaaccctgcaaaagacgaatgaccttct 1239
|| |||||| ||||||| || || |||||||||||
Sbjct: 2647 gatatggaagccctgcagaaaacaaatgaccttct 2681
Score = 176 bits (89), Expect = 3e-43
Identities = 173/201 (86%)
Strand = Plus / Plus
Query: 592 agaaacaaaccctgtctcaagtgacggtggtccgcaagttcccaacttattggatcttgg 651
||||||||||||||| ||| ||||| ||||| ||||| ||||||| |||||||||||
Sbjct: 2052 agaaacaaaccctgtttcaggtgacaatggtctgcaagcacccaactctttggatcttgg 2111
Query: 652 tgaagcttataagcttgctgttggcagtagggggagacagttgtctggtgtgctcgctga 711
||| ||||||||||| |||||||||| || |||||||||||||||||||| || || ||
Sbjct: 2112 tgatgcttataagctagctgttggcaataaggggagacagttgtctggtgcacttgcaga 2171
Query: 712 acaatggattgggaaggattcttcgagagtcagtgatgatctgaagctcttattttcaca 771
||||||||||| |||||||||||| ||| ||||||| ||| ||||| ||||||||| ||
Sbjct: 2172 acaatggattgcgaaggattcttcaagactcagtgacgatttgaagaccttattttctca 2231
Query: 772 gttatctgctgctagagagca 792
||||||||||| |||||||
Sbjct: 2232 actatctgctgctcgagagca 2252
Score = 139 bits (70), Expect = 6e-32
Identities = 115/130 (88%)
Strand = Plus / Plus
Query: 1482 tgaagaattcattgctagattttgaggatgaaagctcagacattttacactgcttgaaga 1541
||||| |||||||| |||||||||| |||||||| | | |||||||| ||||||||||
Sbjct: 2936 tgaaggattcattgttagattttgatgatgaaagggcgtatattttacagtgcttgaaga 2995
Query: 1542 aattggaaaagaggctttgtctgttctctaataatcaactagacttcgctaacagtgaat 1601
||||||||||||||||||||||||| |||||||| ||||||||||| | ||| ||||||
Sbjct: 2996 aattggaaaagaggctttgtctgttttctaataaccaactagacttggttaatggtgaat 3055
Query: 1602 attctggaaa 1611
||||||||||
Sbjct: 3056 attctggaaa 3065
Score = 65.9 bits (33), Expect = 8e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1343 gatatcaaagaggagcacccagaagctagttctgtca 1379
|||||||||||||||||||||||||||| ||||||||
Sbjct: 2800 gatatcaaagaggagcacccagaagctacttctgtca 2836
>29883.m002016 hypothetical protein
Length = 2409
Score = 135 bits (68), Expect = 1e-30
Identities = 134/156 (85%)
Strand = Plus / Plus
Query: 1051 tgctttgtacaaggaattggaagaagaaagaaatgcatctgcaattgctgcaaatcaagc 1110
||||||||| |||||||| || |||||||||||||| || |||||||| |||||||| ||
Sbjct: 1578 tgctttgtataaggaattagaggaagaaagaaatgcttccgcaattgcagcaaatcaggc 1637
Query: 1111 aatggccatgattactagattgcaggaagagaaggcaacactccaaatggaagccttgca 1170
|||||||||||| || || ||||| ||||| ||||| ||||||| ||||| ||| | ||
Sbjct: 1638 aatggccatgatcacaaggttgcaagaagaaaaggcttcactccatatggaggcccttca 1697
Query: 1171 gtgcctgagaatgatggaagaacaagctgaatatga 1206
|| | |||||||||||||||| |||||||| |||||
Sbjct: 1698 gtacttgagaatgatggaagagcaagctgagtatga 1733
>30147.m014034 hypothetical protein
Length = 1830
Score = 85.7 bits (43), Expect = 8e-16
Identities = 118/143 (82%)
Strand = Plus / Plus
Query: 1052 gctttgtacaaggaattggaagaagaaagaaatgcatctgcaattgctgcaaatcaagca 1111
|||||||||| ||||||||| |||||||||| ||| ||||| |||| || ||| | |||
Sbjct: 1024 gctttgtacatggaattggacgaagaaagaagtgcttctgctgttgcagctaataatgca 1083
Query: 1112 atggccatgattactagattgcaggaagagaaggcaacactccaaatggaagccttgcag 1171
||||| ||||| || | ||||||| |||||||||| || | |||||||| |||||||||
Sbjct: 1084 atggcaatgataacccgcttgcaggcagagaaggcagcagttcaaatggaggccttgcag 1143
Query: 1172 tgcctgagaatgatggaagaaca 1194
| | ||||||||||| |||||
Sbjct: 1144 tatcaaagaatgatggaggaaca 1166
>27451.m000241 conserved hypothetical protein
Length = 1374
Score = 77.8 bits (39), Expect = 2e-13
Identities = 114/139 (82%)
Strand = Plus / Plus
Query: 1068 tggaagaagaaagaaatgcatctgcaattgctgcaaatcaagcaatggccatgattacta 1127
|||| ||||| |||| ||| |||||||| ||||||||||| | ||||| ||||| | ||
Sbjct: 287 tggaggaagagagaagtgcttctgcaatagctgcaaatcagactatggctatgataaata 346
Query: 1128 gattgcaggaagagaaggcaacactccaaatggaagccttgcagtgcctgagaatgatgg 1187
| | || |||||||||||| || | ||||||||||| ||||| | || || |||||||
Sbjct: 347 ggctccaagaagagaaggcagcaatgcaaatggaagcattgcaataccaaaggatgatgg 406
Query: 1188 aagaacaagctgaatatga 1206
|||||||| ||||||||||
Sbjct: 407 aagaacaatctgaatatga 425