Jatropha Genome Database
- JcCA0015391.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0015391.10 + phase: 0 /pseudo
(941 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29983.m003314 conserved hypothetical protein 151 9e-36
29634.m002164 conserved hypothetical protein 149 4e-35
30170.m014019 conserved hypothetical protein 90 3e-17
>29983.m003314 conserved hypothetical protein
Length = 1023
Score = 151 bits (76), Expect = 9e-36
Identities = 145/168 (86%)
Strand = Plus / Plus
Query: 752 ggctgttaccgtgcactgtggatgggaaggtgaaggagagctttgcggtggtgaagaaat 811
||||| |||| ||||| ||||| ||||||||| ||| ||||| ||||||||||||||||
Sbjct: 746 ggctgataccatgcacagtggaggggaaggtgcgggaaagcttcgcggtggtgaagaaat 805
Query: 812 cggaggacccatacgaagacttcaagatgtcgatgatggagatgataatggagaaggaga 871
| ||||||||| | ||||| ||||||| ||| ||| |||||||||||||||||||| |||
Sbjct: 806 cagaggacccacaagaagatttcaagaggtcaatgttggagatgataatggagaagcaga 865
Query: 872 tgtttgaggtcaaggatttggagcaacttctgcaatgcttcttgtctt 919
||||||| || |||||||| || ||||| ||||||| ||||||||||
Sbjct: 866 tgtttgaagtgaaggatttagaacaactattgcaatgtttcttgtctt 913
Score = 111 bits (56), Expect = 8e-24
Identities = 119/140 (85%)
Strand = Plus / Plus
Query: 1 atggccgaacatttcaaggtaaaattctgccgggtaatcacatctttcaattcttgccgc 60
|||||| ||| | ||||| |||| |||| ||| || |||||||| |||||||||||||||
Sbjct: 1 atggccaaacctctcaagctaaagttctcccgagtgatcacatccttcaattcttgccgc 60
Query: 61 tccaaggacccatccactcttccatcaaatcctgtcccttcatttctcagactttctccc 120
|| |||||| |||| |||||||||||||||| |||| ||| |||||||||| ||||||
Sbjct: 61 tctaaggactcatcagctcttccatcaaatcccgtccattcgtttctcagacattctccg 120
Query: 121 gtaaaactccgtcttccacc 140
|| ||||||| ||| |||||
Sbjct: 121 gtcaaactccatctgccacc 140
Score = 54.0 bits (27), Expect = 2e-06
Identities = 77/93 (82%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 271 gagttccaatgggagaaagaagagaaatggcacgtagtggctaaaatgtacgacgaa--- 327
|||||||| ||||| |||||||||||||||| || || || ||||| | ||| |||
Sbjct: 265 gagttccactgggaacaagaagagaaatggcatgtcgttgcaaaaatcttcgatgaaaat 324
Query: 328 actcctcgtcggaaaatttataattctttggtt 360
||||||||| | |||||||||| ||||||||||
Sbjct: 325 actcctcgtagaaaaatttatacttctttggtt 357
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 652 aagaaggttaaaaaggcaaaacggcatgttacaag 686
|||||||||||||||| ||||||| ||||||||||
Sbjct: 706 aagaaggttaaaaagggaaaacggtatgttacaag 740
>29634.m002164 conserved hypothetical protein
Length = 1092
Score = 149 bits (75), Expect = 4e-35
Identities = 159/187 (85%)
Strand = Plus / Plus
Query: 733 agattgtcaacgtttgagcggctgttaccgtgcactgtggatgggaaggtgaaggagagc 792
|||||||||| |||| || ||||| |||| ||||| ||||| ||||| ||| ||| ||
Sbjct: 796 agattgtcaaggtttcagtggctgataccatgcacggtggaggggaaagtgcgggaaggc 855
Query: 793 tttgcggtggtgaagaaatcggaggacccatacgaagacttcaagatgtcgatgatggag 852
|| ||||||||||||||||| ||||||||| | ||||| ||||||| ||| ||| |||||
Sbjct: 856 ttcgcggtggtgaagaaatcagaggacccacaagaagatttcaagaggtcaatgttggag 915
Query: 853 atgataatggagaaggagatgtttgaggtcaaggatttggagcaacttctgcaatgcttc 912
||||||||||||||| |||||||||| || |||||||| || ||||| ||||||| |||
Sbjct: 916 atgataatggagaagcagatgtttgaagtgaaggatttagaacaactattgcaatgtttc 975
Query: 913 ttgtctt 919
|||||||
Sbjct: 976 ttgtctt 982
Score = 91.7 bits (46), Expect = 7e-18
Identities = 121/146 (82%)
Strand = Plus / Plus
Query: 1 atggccgaacatttcaaggtaaaattctgccgggtaatcacatctttcaattcttgccgc 60
|||||| ||| | ||||| |||| |||| ||| || |||||||| ||||||||||| |||
Sbjct: 1 atggccaaacctctcaagctaaagttctcccgagtgatcacatccttcaattcttgtcgc 60
Query: 61 tccaaggacccatccactcttccatcaaatcctgtcccttcatttctcagactttctccc 120
|| ||||| |||| |||||||||||||| | |||| ||| |||||||||| ||||||
Sbjct: 61 tctaaggattcatcagctcttccatcaaatgccgtccattcgtttctcagacattctccg 120
Query: 121 gtaaaactccgtcttccaccgccacc 146
|| ||||||| ||| ||||| |||||
Sbjct: 121 gtcaaactccatctgccacctccacc 146
Score = 56.0 bits (28), Expect = 4e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 652 aagaaggttaaaaaggcaaaacggcatgttacaagcaagg 691
|||||||||||||||| ||||||| |||||||||| ||||
Sbjct: 706 aagaaggttaaaaagggaaaacggtatgttacaaggaagg 745
>30170.m014019 conserved hypothetical protein
Length = 1323
Score = 89.7 bits (45), Expect = 3e-17
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 775 gggaaggtgaaggagagctttgcggtggtgaagaaatcggaggacccatacgaagacttc 834
|||| ||||||||||||| | ||||||||||||||||| ||||| || || || || ||
Sbjct: 760 gggatggtgaaggagagcgtggcggtggtgaagaaatcagaggatccttatgaggatttt 819
Query: 835 aagatgtcgatgatggagatgataatggagaaggagatgtttgaggtcaaggatttggag 894
|| | ||| ||| ||||||||||| | |||||| |||||||||||| |||||||| |||
Sbjct: 820 aaaaggtcaatgttggagatgatattagagaagcagatgtttgaggaaaaggatttagag 879
Query: 895 caacttctgcaatgctt 911
||||| |||| |||||
Sbjct: 880 gaacttttgcagtgctt 896