Jatropha Genome Database
- JcCA0012181.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0012181.10 - phase: 0 /pseudo/partial
(1292 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28670.m000104 Ent-kaurene synthase B, chloroplast precursor, put... 591 e-168
29806.m000952 Ent-kaurene synthase B, chloroplast precursor, put... 58 1e-07
29806.m000953 Ent-kaurene synthase B, chloroplast precursor, put... 58 1e-07
>28670.m000104 Ent-kaurene synthase B, chloroplast precursor, putative
Length = 2427
Score = 591 bits (298), Expect = e-168
Identities = 840/1020 (82%), Gaps = 3/1020 (0%)
Strand = Plus / Plus
Query: 1 atgtttgataagattgaagtttcggtttcttcatatgacactgcttgggtagcaatggtc 60
|||||||||||||||||| ||||||||||| | |||||||||||||||||||||||| ||
Sbjct: 1 atgtttgataagattgaactttcggtttctccgtatgacactgcttgggtagcaatgatc 60
Query: 61 ccatctccaaactgcccaaaagctccttttttccctcagtgcactaagtggatagttgat 120
|||||| || | | | |||||||||| || ||| ||||||| || ||||||||||||
Sbjct: 61 ccatctttgaattccgtacaagctcctttctttcctgagtgcacaaaatggatagttgat 120
Query: 121 aatcaactcagtgatggctcttggggtctgccttgtcgtgatccattgttagctaaggat 180
|||||||| |||||||| ||||||||||| ||| || ||||||||||| ||||||
Sbjct: 121 aatcaacttagtgatggttcttggggtcttcctcatcaccatccattgttaataaaggat 180
Query: 181 gctatctcatctacattagcatgcatacttgcattgaagaaatggggtattggtgaaata 240
| | ||||| |||||||||||| | |||||||||||||||||||| |||||||||
Sbjct: 181 accctttcatccacattagcatgcgtccttgcattgaagaaatggggagttggtgaaacc 240
Query: 241 caaatcaataaaggccttcaatttgttgagttgaattctgcttcattaaccgatgaaaag 300
| | || ||||| || || ||| |||| || ||||| ||||||||| ||||| ||
Sbjct: 241 ctggttaacaaaggtctgcagtttattgaattaaattcaacttcattaaatgatgagaaa 300
Query: 301 cagcatacaccagtgggatttgatataatatttcctggtatgcttgagcatgctaaagat 360
|| ||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 caacatacgccaattggatttgatataatatttcctgctatgcttgagcatgctaaagag 360
Query: 361 ttggcgctgaaccttcctttgaaatcagaatatatagatgcaatgctttacaggagagaa 420
||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 361 ttggctttgaacctgcctttgaaatcagatgttatagatgcaatgctccacaggagagat 420
Query: 421 ttagagcttagaagtggctgtaat---agcgacccagagggaaggaaagtctatttagct 477
| || |||| ||||||| | | ||| | |||||||||| |||| ||| ||||||
Sbjct: 421 gtggatcttaagagtggctctggtggcagcaatacagagggaagaaaagcctacttagct 480
Query: 478 tatatttcagaaggaattggagaattacaagattggaaaatggtcatgaaatatcaaaga 537
|| ||| ||||||| || ||| |||| || |||||| ||||||||||||| |||||| ||
Sbjct: 481 tacattgcagaagggatcggaaaattccaggattgggaaatggtcatgaagtatcaacga 540
Query: 538 aagaatgggtcactgttcaattcaccatccaccaccgctgctgcttttaatcaccttcag 597
|||||||| |||||||||||||||||||| ||||| || |||||||||| ||| ||||
Sbjct: 541 aagaatggttcactgttcaattcaccatctaccactgcagctgcttttagtcatcttcgt 600
Query: 598 gatgctggttgtcttcattacctgcacttagtcttagagaagtttggaaatgcagttcca 657
|||||| ||||||||| || ||||| | || ||| |||| | ||||||||||||||||
Sbjct: 601 aatgctgattgtcttcagtatctgcagtctgttttacagaaatatggaaatgcagttcca 660
Query: 658 accatttatcctttggatatatatgctcgtctctatatggttgatactcttgaaaggttg 717
|| |||||||| | || ||||| ||||||| ||||||||| | |||||||||||||
Sbjct: 661 actatttatccactagacgtatattctcgtcttcttatggttgacattcttgaaaggttg 720
Query: 718 ggaattgatcggcatttcaaggaggaaataaaaactgtattggatgaaacatacagatac 777
||||||||||||||||||| | ||||||||||| ||| |||| ||||||||||||||
Sbjct: 721 ggaattgatcggcatttcaggaaggaaataaaattagtactggaagaaacatacagatat 780
Query: 778 tgggtgcaagggaatgaagagatatttctagattgcacaacctgtgcaatggcattccga 837
||| |||| ||||||||||| |||||||||||||| | ||||| || |||||||| |||
Sbjct: 781 tggttgcaggggaatgaagaaatatttctagattgtattacctgcgccatggcatttcga 840
Query: 838 atattgcgtatcaatggatatgatgtgtcttcagatatattgattcaattcactgaggaa 897
||||| ||| |||||||||||||||| ||||||||| |||| | ||||| || |||||
Sbjct: 841 atattacgtgtcaatggatatgatgtctcttcagatgtatttacccaatttacagaggac 900
Query: 898 tacttctgtaattcacttgaaggatatttaaaggacacaagggctgccttagagttatac 957
| |||| |||| |||| ||||||||| |||||||| ||| ||| ||||||||||||
Sbjct: 901 catttcttcgattcgcttggaggatatttgaaggacacgaggactgtgttagagttatac 960
Query: 958 aaagcttcacagttaatttatccagatgaatcaattctggaagaactagattcatggaca 1017
| ||||||||| || ||||||| |||||| || || |||| ||| | |||||||||||
Sbjct: 961 agagcttcacaaatactttatccggatgaaccacttttggagaaacaaaattcatggaca 1020
>29806.m000952 Ent-kaurene synthase B, chloroplast precursor,
putative
Length = 2337
Score = 58.0 bits (29), Expect = 1e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 643 ggaaatgcagttccaaccatttatcctttggatatatatgctcgtctct 691
|||||||||||||| || ||||||||||| ||||| ||||| |||||||
Sbjct: 796 ggaaatgcagttcctacaatttatccttttgatatctatgcccgtctct 844
>29806.m000953 Ent-kaurene synthase B, chloroplast precursor,
putative
Length = 2328
Score = 58.0 bits (29), Expect = 1e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 643 ggaaatgcagttccaaccatttatcctttggatatatatgctcgtctct 691
|||||||||||||| || ||||||||||| ||||| ||||| |||||||
Sbjct: 823 ggaaatgcagttcctacaatttatccttttgatatctatgcccgtctct 871