Jatropha Genome Database

JcCA0011081.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0011081.20 + phase: 0 /partial
         (993 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29878.m000239 cytochrome P450, putative                                60   3e-08

>29878.m000239 cytochrome P450, putative
          Length = 1317

 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 105/130 (80%)
 Strand = Plus / Plus

                                                                       
Query: 239 ttgttatttcttcaccggaagctgccaaaaaagtgatgaaaactcacgacatcattttcg 298
           |||| |||||||| || |||||||| | | |||||||||||||||| ||||| |  || |
Sbjct: 254 ttgtcatttcttcgcctgaagctgcaagagaagtgatgaaaactcatgacattagctttg 313

                                                                       
Query: 299 ctcaaaggccttatctgcttgcagcggacattatcttgtataacttcaaagacatcgctt 358
           ||||||| || | | ||||||||||    ||| || ||||||| ||||||||||| | ||
Sbjct: 314 ctcaaagaccctttgtgcttgcagcaagtattgtcatgtataatttcaaagacattgttt 373

                     
Query: 359 ttgcccctta 368
           |||| |||||
Sbjct: 374 ttgcacctta 383



 Score = 60.0 bits (30), Expect = 3e-08
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 707 tgcatcaagaagctgatataatgcttgaaaatataattaatgaacataaagaaaataa 764
           ||||||||||||| |||| ||| |||||||||||||| || ||||||| ||| |||||
Sbjct: 521 tgcatcaagaagcagatacaattcttgaaaatataatcaaagaacatagagacaataa 578