Jatropha Genome Database
- JcCA0009771.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0009771.20 - phase: 0
(1059 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013742 E3 ubiquitin ligase PUB14, putative 674 0.0
>30170.m013742 E3 ubiquitin ligase PUB14, putative
Length = 1059
Score = 674 bits (340), Expect = 0.0
Identities = 856/1028 (83%)
Strand = Plus / Plus
Query: 24 tttcacttacatggggaggagcttcggaaatacgaatgtaaacgatgattcctctgcttt 83
||||||||||||||| |||||||| || || |||| ||| ||||||||||| ||||||||
Sbjct: 24 tttcacttacatgggaaggagctttggcaacacgagtgttaacgatgattcttctgcttt 83
Query: 84 cagcgactgcaatagtgacagatccggcgagttcccgacggcgtcttctgagagccggcg 143
||||| ||||| || ||||||||||| |||||||| |||||||| |||||||| ||||
Sbjct: 84 tagcgattgcaacagcgacagatccggagagttccctacggcgtcgtctgagagtaggcg 143
Query: 144 attatttctagcctgcacatcagagaactcagatgatctgattcgccagctcgtattgga 203
|||||| |||| ||| || | ||||| || || ||| | || |||||||| ||||||||
Sbjct: 144 attattaatagcttgcgcagcggagaattctgacgattttatccgccagcttgtattgga 203
Query: 204 tcttgacgcctgttcgattgatgagcaaaagcaagcggctatggagattaggctcctggc 263
||| || | ||||| || || |||||||| |||||||| ||||||||||| ||||| ||
Sbjct: 204 tctcgaatcatgttctatcgacgagcaaaaacaagcggccatggagattagactcctcgc 263
Query: 264 caagaacaaaccagagaaccgcctcaaaattgccagagcaggggcgattaagccactgat 323
|||||| ||||||||||| || |||||||||| | |||||| ||| ||||||| ||||
Sbjct: 264 caagaataaaccagagaatcgtctcaaaattgttaaagcaggcgcgcttaagcctttgat 323
Query: 324 ttcacttatatcgtcatcggatcttcagcttcaagaatatggtgtcacagcgattttgaa 383
|||| | ||||| | |||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct: 324 ttcattaatatcctgttcggattctcagcttcaagaatacggtgtcacagcaattttgaa 383
Query: 384 tctctcgctctgcgacgaaaacaaagaattgattgcttcatcaggagcgattaagccact 443
| | || | || || || || |||||| |||||||||| |||||||||||||||||| |
Sbjct: 384 tttatctttatgtgatgagaataaagaagtgattgcttcgtcaggagcgattaagccatt 443
Query: 444 tgttagggctttgagaacagggacatcgacggccaaagaaaacgcggcctgtgctctgct 503
||||||||||| | |||||||||||| || || ||||||||||| || |||||| ||||
Sbjct: 444 agttagggctttaaaaacagggacatcaactgctaaagaaaacgcagcatgtgctttgct 503
Query: 504 tcgcctctcgcaagtagaagaaaacaaggtagcaatcggacggtcaggagcgattccgct 563
|| ||||| ||||||||||||||||| || ||||||||||| ||||| ||||||||||
Sbjct: 504 acgtctctcacaagtagaagaaaacaaagtcgcaatcggacgatcagggtcgattccgct 563
Query: 564 actggtgagcttactggaagttggaggaattcgggggaaaaaggacgcagcaacagctct 623
| |||| |||||| || |||||| |||| |||||||| || |||||||||||| |
Sbjct: 564 tttagtgaacttactcgagaccggaggatttcgcgggaaaaaagatgcagcaacagcttt 623
Query: 624 gtattcgctgtgttcagttaaggagaataagatcagggctgtgcacgcggggatcatgaa 683
|||||| | ||||| || || || |||||||| ||||| || || || |||||||||||
Sbjct: 624 atattcgttatgttcggtgaaagaaaataagatgagggccgtccaagctgggatcatgaa 683
Query: 684 gccactggtggaattgatggctgattttgggtcaaatatggttgacaaatcagcgtttgt 743
||| | |||||||| ||||||||||||| |||||| |||||||| || |||||||||||
Sbjct: 684 accattagtggaattaatggctgattttgagtcaaacatggttgataagtcagcgtttgt 743
Query: 744 cttaagcgtcttagttagcgttccggaggcgagaacggcgttggttgaggaaggaggtat 803
|| || | | ||| ||| |||| |||||||||||||| || ||||||||||| ||
Sbjct: 744 tttgagtcttctggtttcggttacggaagcgagaacggcgttagtcgaggaaggagggat 803
Query: 804 tcctgtgctggttgagatcgtggaggtcgggtcgcagagacagaaggagattgcggttgt 863
|| || ||||| ||||| | ||||| || || || || || || |||||||| ||||
Sbjct: 804 accggttctggtagagataatcgaggttggttctcaaaggcaaaaagagattgctgttgc 863
Query: 864 tatattattgcagatttgcgaggataatttgacttatcgtgttatggtggctcgcgaagg 923
||| |||||||||||||| ||||||||||| | ||||| |||||||| ||| |||||
Sbjct: 864 tattttattgcagatttgtgaggataatttaatgcgtcgtgctatggtggttcgtgaagg 923
Query: 924 agcgattcctcccttggttgctttgtcgcagtccggcaccaatcgcgccaagcaaaaggc 983
||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 924 tgcgattcctcctttgattgctttgtcacagtccggcaccaatcgcgccaaacaaaaggc 983
Query: 984 ggagacactgatagatcttctacggcaaccaagatccggtaacgccgctgccaggacatc 1043
||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |
Sbjct: 984 ggaaacactgatagatcttctacggcaaccaagatccgggaacgccgctgccagaacacc 1043
Query: 1044 agacgtgt 1051
||||||||
Sbjct: 1044 agacgtgt 1051