Jatropha Genome Database

JcCA0009632.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0009632.10 + phase: 2 /partial
         (397 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008909 Nicotianamine synthase, putative                        161   4e-39

>30128.m008909 Nicotianamine synthase, putative
          Length = 963

 Score =  161 bits (81), Expect = 4e-39
 Identities = 168/197 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   gttttcttggctgctttagttggtatggacaaagaagagaaagttagagttcttgatcat 61
           ||||||||||| ||| ||||||| |||||||| || |||||  |||| ||  ||||||||
Sbjct: 586 gttttcttggcagctctagttggaatggacaaggaggagaagattagggtcattgatcat 645

                                                                       
Query: 62  ttggccaaaaatatggctcgtggtgctatgttactgctaaggagcgctaatggagctagg 121
           ||||||||  | ||||||| ||| ||||| ||| |||||||||| ||| |||| ||||||
Sbjct: 646 ttggccaagtacatggctcctggagctattttaatgctaaggagtgctcatggtgctagg 705

                                                                       
Query: 122 gcttttctttatcctgttgttgatccttgtgatcttcaaggtttcgaggttctttctgtg 181
           |||||||| || || || || |||||||||||||| | ||| ||||||||||||||||||
Sbjct: 706 gcttttctctacccagtggtcgatccttgtgatctccgagggttcgaggttctttctgtg 765

                            
Query: 182 tttcatccaactgatga 198
           |||||||| ||||||||
Sbjct: 766 tttcatcctactgatga 782



 Score = 58.0 bits (29), Expect = 4e-08
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 320 tgctctgagatcgaagcttttaatccacttaaccatggaaatatggttgaagaattgact 379
           |||||||||||| |||| || ||||| || ||||||||||| ||| |||| |||||| | 
Sbjct: 883 tgctctgagatccaagccttcaatcccctcaaccatggaaacatgattgaggaattggcc 942

                            
Query: 380 attgaggagaaactctc 396
           ||||||||  |||||||
Sbjct: 943 attgaggaccaactctc 959