Jatropha Genome Database

JcCA0008021.40
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0008021.40 + phase: 0 
         (567 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011094 Alpha-expansin 7 precursor, putative                    283   6e-76
29729.m002361 Alpha-expansin 8 precursor, putative                     60   2e-08

>30190.m011094 Alpha-expansin 7 precursor, putative
          Length = 801

 Score =  283 bits (143), Expect = 6e-76
 Identities = 400/486 (82%), Gaps = 6/486 (1%)
 Strand = Plus / Plus

                                                                       
Query: 10  tttttcaattcatggagccttaacttcttattgattgcattaacatcgacattgataggc 69
           |||||| ||||||||||||||| ||||||  |  | |||| || |||  ||||||| |||
Sbjct: 10  tttttccattcatggagccttagcttcttcctagtagcatcaatatcagcattgattggc 69

                                                                       
Query: 70  acatccatggctataggttatagtactcaattgcccgtatttcgtccaagtcaatggcat 129
           |||||||||||| |||||||| |||| |      | || || || ||||| ||||||   
Sbjct: 70  acatccatggctgtaggttatggtaccc------ctgttttccggccaagccaatggggc 123

                                                                       
Query: 130 ctcgctcatgccacattttatggtgatgaaactgcctctgcgacaatgggaggggcttgt 189
           || ||||||||||| |||||||| || || || ||||| || || ||||||||||| |||
Sbjct: 124 cttgctcatgccactttttatggggacgagacggcctcagcaacgatgggaggggcatgt 183

                                                                       
Query: 190 gggtatggaaatttgttccaaaatggatatggaacggacacagcagcattgagcacaaca 249
           || ||||| |||||||| |||||||| |||||||| || ||||| ||| |||||||| ||
Sbjct: 184 ggatatgggaatttgtttcaaaatggttatggaacagatacagctgcactgagcacagca 243

                                                                       
Query: 250 ttattcaacaatgggtatgcatgtgggacatgttatcaaataaagtgtgtgcaatctcct 309
           ||||||||  | || ||||| ||||| || ||||| ||||| |||||||||||||| || 
Sbjct: 244 ttattcaatgacggatatgcttgtggaacttgttaccaaatcaagtgtgtgcaatcaccc 303

                                                                       
Query: 310 tggtgctataaagatgtgccatttactacagtaactgctacgaacctttgccctccaaat 369
           |||||||  || ||||| || ||||| || || |||||||| ||| ||||||| ||||||
Sbjct: 304 tggtgcttcaacgatgtaccgtttaccacggtgactgctactaacatttgcccaccaaat 363

                                                                       
Query: 370 tggagtgaagactccaataatgggggatggtgcaaccctcctcgagttcattttgacatg 429
           |||||| | ||||| ||  |||| || ||||| |||||||||||||| || |||||||||
Sbjct: 364 tggagtcaggactctaacgatggtggttggtgtaaccctcctcgagtccactttgacatg 423

                                                                       
Query: 430 tccaaacctgctttcatgaaaattgcccaatggaaagctggcatcgtcccagttatgtat 489
           ||||| ||||||||||||||||||||||||||||| |||||||| || || |||||||| 
Sbjct: 424 tccaagcctgctttcatgaaaattgcccaatggaaggctggcattgttcctgttatgtac 483

                 
Query: 490 cgcagg 495
           ||||||
Sbjct: 484 cgcagg 489


>29729.m002361 Alpha-expansin 8 precursor, putative
          Length = 759

 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 172 acaatgggaggggcttgtgggtatggaaatttgt 205
           ||||||||||| ||||||||||||||||||||||
Sbjct: 136 acaatgggaggtgcttgtgggtatggaaatttgt 169