Jatropha Genome Database
- JcCA0008021.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0008021.30 - phase: 0
(474 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m011093 Histone deacetylase complex subunit SAP18, putative 299 8e-81
30174.m008933 Histone deacetylase complex subunit SAP18, putative 100 1e-20
>30190.m011093 Histone deacetylase complex subunit SAP18, putative
Length = 498
Score = 299 bits (151), Expect = 8e-81
Identities = 306/357 (85%), Gaps = 3/357 (0%)
Strand = Plus / Plus
Query: 121 gatcgcgaaaagacttgccctttattgcttcgagttttcacaaagattggaagtcaccac 180
||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 142 gatcgcgaaaagacttgtcctttattgcttcgagttttcaccaagattggaaatcaccac 201
Query: 181 aagatggaagactttgcagttggaggcaaagaacccaaggatg---aggttcaaatatat 237
||||||||||| |||||||| ||||||||||||| ||||||| |||||||||| ||
Sbjct: 202 aagatggaagattttgcagtgagaggcaaagaaccgaaggatgatgaggttcaaatttac 261
Query: 238 acgtggaaagatgcaactcttcacgaactaactgaccttgtcaaagaggtggttcccgag 297
|| ||||||||||| || |||| ||| ||||||| ||||| |||||||| | ||| |||
Sbjct: 262 acatggaaagatgctacacttcgcgagttaactgatcttgttaaagaggttgctccggag 321
Query: 298 gcaaggaggcaaagtgcaagactgtcatttgcttttgtatatcctgatatacatggtcgt 357
|||||||| || ||||| | |||| |||||||||||||||||||||| |||||| |||
Sbjct: 322 gcaaggagaagaaatgcaaaattgtcgtttgcttttgtatatcctgataaacatggccgt 381
Query: 358 tttatgttgagagtggtgggagtgacacattcaaatgcaagacggccatatgatgccaag 417
||| | |||||| |||||||| |||| ||||||| |||||||| ||| ||||| | | |
Sbjct: 382 tttgttttgagaatggtgggaatgactcattcaagcgcaagacgaccagatgattctagg 441
Query: 418 gcattgggtgaactcagcttccagattggagattacttagatgtggcaatcctgtaa 474
|||||| | ||||| | || ||||||||||||||||| ||||||||||||||||||
Sbjct: 442 tcattggttcaactcggttttcagattggagattacttggatgtggcaatcctgtaa 498
>30174.m008933 Histone deacetylase complex subunit SAP18, putative
Length = 444
Score = 99.6 bits (50), Expect = 1e-20
Identities = 280/356 (78%), Gaps = 3/356 (0%)
Strand = Plus / Plus
Query: 121 gatcgcgaaaagacttgccctttattgcttcgagttttcacaaagattggaagtcaccac 180
||||| |||||||| || ||||| |||||||| ||||| || ||||| || ||||| ||
Sbjct: 88 gatcgtgaaaagacgtgtcctttgttgcttcgcgtttttactaagatagggagtcatcat 147
Query: 181 aagatggaagactttgcagttggaggcaaagaacccaaggatgaggttcaaatatatacg 240
| |||||| ||||| || ||||||| || |||||||||||||| ||||| || ||
Sbjct: 148 tccaaggaagattttgccgtgagaggcaaggagcccaaggatgaggtccaaatctacaca 207
Query: 241 tggaaagatgcaactcttcacgaactaactgaccttgtcaaagaggtggttcccgaggca 300
||||| ||||| ||||||| || ||||||| || ||||||||||||| ||| | |||
Sbjct: 208 tggaaggatgctactcttcgagagttaactgatctggtcaaagaggtggctccagcagca 267
Query: 301 aggaggcaaagtgcaagactgtcatttgcttttgtatatcctgatatacatggtcgtttt 360
||||| | ||| ||||| ||||||||||||||||||||||| | | |||| |||||
Sbjct: 268 aggagaagagatgctagactttcatttgcttttgtatatcctgacaaaaatggacgtttc 327
Query: 361 atgttgagagtggtgggagtgacacattcaaatgcaagacggccat---atgatgccaag 417
|| || ||| ||||||| |||| |||| ||| ||| | || |||||| |||
Sbjct: 328 gtggtgcgagaggtgggaaagacatattccaatagaagtggaaaattagatgatggcaaa 387
Query: 418 gcattgggtgaactcagcttccagattggagattacttagatgtggcaatcctgta 473
||||||| ||| || |||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 388 gcattggctgagcttggcttccagattggagattacttggatgttgcaattctgta 443