Jatropha Genome Database
- JcCA0008021.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0008021.20 + phase: 0
(972 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m011092 conserved hypothetical protein 799 0.0
>30190.m011092 conserved hypothetical protein
Length = 963
Score = 799 bits (403), Expect = 0.0
Identities = 738/849 (86%), Gaps = 3/849 (0%)
Strand = Plus / Plus
Query: 127 ggaaggcatttttgtgttcgacgcagaatttttatgcttccaatcaaggcaactgctgac 186
|||| |||||| | |||||| ||||||||| || ||||||||||||| || ||||||||
Sbjct: 115 ggaaagcatttatctgttcgtcgcagaattcttttgcttccaatcaaagctactgctgat 174
Query: 187 caacaa---ggtcaggtgggagaagaccaggttgtggacagtaaaattctgcagtactgt 243
|||||| ||| | |||| || ||| | || || || ||||||||||||||||||||
Sbjct: 175 caacaacaaggtaaagtggaaggagatgaagtcgttgatggtaaaattctgcagtactgt 234
Query: 244 agcatagacaggaaagagaaaaggtcaataggtgaaatggagcaggagtttcttcaagca 303
|||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 235 agcatagacaagaaagataaaaagtcaataggtgaaatggagcaggagtttcttcaagct 294
Query: 304 ttacaatcattttattatgagggaaaagctataatgtcaaatgaagaatttgataatctc 363
| ||| | ||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 295 ctgcaagctttttactatgagggaaaagcaataatgtcgaatgaagaatttgataatctc 354
Query: 364 aaggaagaactaatgtgggaaggaagcagtgttgttatgctaagttctgatgagcagaag 423
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 355 aaggaagaactaatgtgggaaggaagcagtgttgttatgctaagttgtgatgaacagaag 414
Query: 424 tttctggaagcttcaatggcttatgtatccgggaaaccaattttgagtgatcaagaattt 483
||| ||||||| ||||||||||||||||| || || |||||| |||||||| |||| |||
Sbjct: 415 tttttggaagcctcaatggcttatgtatcaggaaatccaattatgagtgatgaagagttt 474
Query: 484 gacgagttgaagatgagactaaagcaagaaggtagtgaaatcgtagttgagggtcctcga 543
|| | |||||| | ||| | ||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 475 gatcaattgaagctaagattgaagcaagaaggcagtgagattgtagtagagggtccgcgg 534
Query: 544 tgcagtcttcgtagtagaaaggtttacagtgacctgtctgttgactatttaaagatgttc 603
|||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 535 tgcagtcttcgtagtagaaaggtttacagtgatctatctgttgactacttaaaaatgttc 594
Query: 604 ctgttgtatgtccctgcaactgttgttgcattaggcttgtttttcttcttggatgatttg 663
||| || | |||||||| ||||||||||| ||||||||||||| |||||||||||| |
Sbjct: 595 ctgctgaacgtccctgccgctgttgttgcactaggcttgttttttttcttggatgatctt 654
Query: 664 actggatttgaaataacatatcttctggagcttccagaaccattcagcttcatcttcaca 723
|| ||||||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||
Sbjct: 655 acaggatttgaaattacatatcttttggagcttccagagccattcagctttatcttcaca 714
Query: 724 tggttcgctgcggtgccattaatagtctggttagctcagtctttcacaaatgcaattgta 783
||||| ||||| ||||| | |||||||||||| ||| |||||||||||||||||||||
Sbjct: 715 tggtttgctgcagtgcctgtcatagtctggttatctctgtctttcacaaatgcaattgtg 774
Query: 784 aaagactttttgatcttgaagggcccttgtcccaactgcggtaccgaaaacctctccttc 843
||||| || |||||| |||||||||| || |||||||| ||||| ||||| | ||||||
Sbjct: 775 aaagatttcttgatcctgaagggcccatgccccaactgtggtactgaaaatcagtccttc 834
Query: 844 ttcggaaccattctttcagtttcaagcggtggtgtaaccaacatggtcaagtgctcaaat 903
|||||||| || | || |||| || |||||| ||||||| ||||| |||||||||
Sbjct: 835 ttcggaacaatattgtccatttccagtggtggtaccaccaacagcgtcaaatgctcaaat 894
Query: 904 tgtggaactgatatggagtatgactcgaagacacgattgattacactgccagaaggaagc 963
|||||||||||||||| ||| || || |||||||||||||||||||||||||||||||||
Sbjct: 895 tgtggaactgatatggtgtacgattccaagacacgattgattacactgccagaaggaagc 954
Query: 964 aatgcttga 972
|||||||||
Sbjct: 955 aatgcttga 963