Jatropha Genome Database
- JcCA0007981.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0007981.20 - phase: 0
(864 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29813.m001474 Origin recognition complex subunit, putative 751 0.0
>29813.m001474 Origin recognition complex subunit, putative
Length = 864
Score = 751 bits (379), Expect = 0.0
Identities = 741/864 (85%)
Strand = Plus / Plus
Query: 1 atggatctctcggaaattgcaaagaaactgggtctctccgaatccaagaatctgatccga 60
||||||||||| |||||||| |||||||| |||||||| |||||||| | | |||||
Sbjct: 1 atggatctctcagaaattgctaagaaacttggtctctctgaatccaaacacattgtccga 60
Query: 61 aaagcggcggagctccgccgtctctgtgacgtgcagtttgactcgtccattatcggagtt 120
|||||||| ||||||||||| ||||||||||| ||||||||||| ||| | |||||| ||
Sbjct: 61 aaagcggccgagctccgccgcctctgtgacgtccagtttgactcctccgtcatcggaatt 120
Query: 121 ggagaggttagcaaggctataatctgcttagaaatcgctgcaacaagatttcaagtgatt 180
|||||||| |||||||||| || ||||||||||| || || ||||| ||||| ||||||
Sbjct: 121 ggagaggtctgcaaggctattatttgcttagaaatagcagctacaaggtttcaggtgatt 180
Query: 181 tttgatagacaagctgcaataagactgagtggactgtcagagaaggcttatactagatct 240
|||||||| || ||||| ||||||||||||||| |||||||||| ||||||| ||||||
Sbjct: 181 tttgataggcaggctgctataagactgagtggaatgtcagagaaagcttataatagatcc 240
Query: 241 ttcaattcactgcaaaacagtctcggtgtcaaaacaaagcttgatattagagaattgggg 300
|||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcaattcgcttcaaaatagtctcggtgtcaaaacaaagcttgatattagagaattggga 300
Query: 301 attcaatttggctgcataaggctgattcctttagtgaaaaaaggattatcattgtacaag 360
||||||||||| || | ||||| |||||||| |||||||| || ||||||||||||||
Sbjct: 301 attcaatttggatgtgtgaggctcattccttttgtgaaaaatggcctatcattgtacaag 360
Query: 361 gagcggtttcttgcatcactgccggctactagacgagcaagtgctgacttcactcggcct 420
| || || ||||||||| | || || | || || ||| ||||||||| || ||||||
Sbjct: 361 caacgcttccttgcatcattaccagcctcgaggcgcccaactgctgactttacccggcct 420
Query: 421 gtgttcactgcagttgcattctacttgtgcgcnnnnnnncacaagctcaagatagacaaa 480
|| |||||||||||||| ||||||||||| || |||||||| |||||||| ||
Sbjct: 421 gtcttcactgcagttgctttctacttgtgtgcaaagagacacaagctgaagatagataag 480
Query: 481 attaagttgattgaagtttgtggcacatctgaatctgaattcaaaagtgtctccacctcc 540
|||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||
Sbjct: 481 cttaaattgattgaagtttgtggcacgtccgaagctgaattcaaaagtgtctccacctca 540
Query: 541 atgaatgacctctgctatgatgtgtttggcatctcaaaagaaaagaaggatccaagagaa 600
||||| ||||| ||| ||||||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 541 atgaaggacctttgccatgatgtttttgggatctcaaaggaaaagaaggatcccagagag 600
Query: 601 gtgaagggtaaccgagaactgctggatgttttacctgagaaaagaaaatttgaagatggt 660
|||||| | |||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 601 gtgaagtgcaaccgagaactgctggatgtcttacctgagaaaagaaaatttgaggatggt 660
Query: 661 ggttatttatctgatgatggagcagagctttcaagttacaagaagcgcaaaacagcggag 720
|| |||||||||||||||||| ||||||||||||||||||||||||| || | || ||||
Sbjct: 661 ggatatttatctgatgatggaccagagctttcaagttacaagaagcgtaagagagaggag 720
Query: 721 aaagttgcttatcaggagtggaagtcttctgtcttatcatccaatgcaaagagcaaatca 780
| |||||||||| |||| ||||| || || ||| | |||||||||| ||| |||| ||
Sbjct: 721 agagttgcttatgaggattggaaatcctccgtcatgtcatccaatgagaagggcaaggca 780
Query: 781 aaaggtccttgtaagcaaaccagacaaactcgccttaactttttcaaagaagttcctgag 840
|||||| |||| |||| ||||| |||||||||||| ||||| ||||| |||||||||||
Sbjct: 781 aaaggttcttgcaagcgaaccaagcaaactcgccttgactttctcaaaaaagttcctgag 840
Query: 841 actgcagggttggaagctctgtga 864
||| |||| ||||||||| |||||
Sbjct: 841 actacaggtttggaagctttgtga 864