Jatropha Genome Database
- JcCA0006671.60
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0006671.60 - phase: 0
(2190 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30146.m003620 conserved hypothetical protein 993 0.0
29794.m003464 conserved hypothetical protein 86 1e-15
>30146.m003620 conserved hypothetical protein
Length = 2145
Score = 993 bits (501), Expect = 0.0
Identities = 888/1017 (87%)
Strand = Plus / Plus
Query: 841 gtggggaggagggtggcaaagccagtgaatttgatgcagatatttgcagagcttgatgat 900
|||||||||||| | |||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 805 gtggggaggaggccaggaaagccagtgaatttgatacagatatttgctgatcttgatgat 864
Query: 901 cacttcttgaaggcttctgaaagtgctcatgaggtttccaagatgctggaggccacacga 960
|| |||||||| |||||||||||||||||||| ||||| |||||| ||||||| || ||
Sbjct: 865 catttcttgaaagcttctgaaagtgctcatgaagtttctaagatgttggaggctactcgg 924
Query: 961 ttacattatcactctaatttcgcagataataggggacatattgatcactctaaaagagtg 1020
|| ||||||||||||||||| || |||||| | |||||||||||||||||||||||||||
Sbjct: 925 ttgcattatcactctaattttgctgataatcgcggacatattgatcactctaaaagagtg 984
Query: 1021 atgcgagttattacatggaatcgatcatttaaaggaattcctagtgttgatgatggtaaa 1080
||||| |||||||||||||| || |||||||||||| | ||| ||||| |||||||||
Sbjct: 985 atgcgtgttattacatggaaccggtcatttaaaggactgcctgatgttggtgatggtaag 1044
Query: 1081 gatgattttgatacagaggagcaggaaactcatgctactgtgttggataagatgctagct 1140
||| ||||||| ||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 1045 gataattttgaagaagaggagcatttaactcatgctacggtgttggataagatgctagct 1104
Query: 1141 tgggaaaagaagctttatgatgaagtgaaagcaggtgaaataatgaaatttgaatatcaa 1200
|||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |||
Sbjct: 1105 tgggaaaagaagctttatgacgaagtgaaggcaggtgaaattatgaaatttgaataccaa 1164
Query: 1201 aagaaggtcgcttcactgaataagcagaagaagcggggaagtaacgctgaatcattggaa 1260
|||||||| |||| ||||||| ||||||||| |||| |||||| |||||||||||||
Sbjct: 1165 aagaaggttgctttgctgaataggcagaagaaaaggggtagtaactctgaatcattggag 1224
Query: 1261 aaattgaaagcagctgtaagccatctgcatacaagatacattgtggacatgcaatcgatg 1320
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1225 aaattaaaagcagctgtaagccatctgcatacaagatacattgtagacatgcaatcgatg 1284
Query: 1321 gattcaacagttgcagagataaaccgtttacgtgatgaacaattatatccaagacttgct 1380
||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |
Sbjct: 1285 gattcaacagttgcagagataaaccatttgcgtgatgaacaattatatccaaaacttgtt 1344
Query: 1381 cagcttgttgatgggatggccaccatgtgggaaactatgcaatatcaccatcatacccag 1440
|||||||||||||||||||| || ||||||||||| ||||||||||||||| ||| ||||
Sbjct: 1345 cagcttgttgatgggatggctacgatgtgggaaaccatgcaatatcaccatgataaccag 1404
Query: 1441 tccaagcttgtatacgccctgagatctttggacatttctgaatcccccaaggaaactagt 1500
|| ||| ||||||| |||||||||||||||||||||||| | |||| ||||||||| |||
Sbjct: 1405 tcaaagattgtatatgccctgagatctttggacatttctcagtccctcaaggaaaccagt 1464
Query: 1501 gaatatcattatgatcgtacttttcagttgtgtggagttgtaagagattggcagaaccag 1560
|||||||||||||||||||||| |||| ||||||| ||||| |||||||||| |||
Sbjct: 1465 gaatatcattatgatcgtacttgtcagctgtgtggtgttgtgcgagattggcatgcacag 1524
Query: 1561 ttttgtaagcttgtagaccaccaaaaagggtacataaaggcactgaactcttggttaaag 1620
||||||| ||| ||||| | || |||| |||||||||||||| ||| |||| |||||
Sbjct: 1525 ttttgtagacttatagactatcagaaagattacataaaggcactcaacaattggataaag 1584
Query: 1621 ctaaatctcatccctattgagagcaacttgaaagaaaagatctcttcaccgccaagggtt 1680
||||||||||| ||||| |||||||| |||||||| ||| | ||||| || |||||| |
Sbjct: 1585 ctaaatctcattcctatagagagcaatttgaaagagaaggtttcttctccaccaaggatc 1644
Query: 1681 cagaatcctccaattcatgcacttctcatagcttggaatgatgatttggaaaaacttcca 1740
|||||||| |||||||||| ||||||||||||||| ||||| | ||||| | ||| |||
Sbjct: 1645 cagaatcccccaattcatgtgcttctcatagcttggcatgatcacttggacagactccca 1704
Query: 1741 gatgaaatcgcaagaagtgcaatagttaattttgctgcagtaatacagaccatagtacat 1800
||||| || ||||||||||||||| || |||||||| || | |||||||| ||||||
Sbjct: 1705 gatgagattgcaagaagtgcaataagcaactttgctgctgttgtccagaccattgtacat 1764
Query: 1801 catcaagaagaagaattgaagataagagaaaaatgtgaggccacaagaagggagctt 1857
|||||||||||||| | ||||| || || || |||||||| ||| ||| |||||||
Sbjct: 1765 catcaagaagaagaggtaaagatgagggagaagtgtgaggctacacgaaaggagctt 1821
Score = 121 bits (61), Expect = 2e-26
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 1 atgggctgtacgcaatccaagatcgagaatgaagaagccgtggctcgttgtaaggagcgc 60
||||| ||||| ||||| ||||||||||| |||||||| || | | || || ||||||
Sbjct: 1 atgggttgtacccaatcaaagatcgagaacgaagaagcagtttcgagatgcaaagagcgc 60
Query: 61 aaacaattcatgaaagaagccgtctccgcccgcaacgctttcgccgccgcacactccgcc 120
|||||||||||||||||||| || || ||||| || ||||| ||||||||||||||||||
Sbjct: 61 aaacaattcatgaaagaagctgtgtctgcccggaatgcttttgccgccgcacactccgcc 120
Query: 121 tacgctatctccttgaaaaacactggagctgctcttagtga 161
||| |||| |||||||| ||||| || ||||| || |||||
Sbjct: 121 tactctatttccttgaagaacaccggcgctgccctcagtga 161
Score = 119 bits (60), Expect = 7e-26
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 2044 caggtgagggagaaatctttggcaagtcttaaacatcgcttgccggagctctttacagca 2103
|||||||||||||| |||||||| ||||| ||| |||||||| |||||||||| |||
Sbjct: 2005 caggtgagggagaagtctttggcgagtctcaaaacacgcttgccagagctctttagggca 2064
Query: 2104 atgtctgacattgctctagctttttcagccatgtacagtaacttgaggtccatagc 2159
|||||||| ||||||||||||| | ||| |||||||||||| ||||||||||||||
Sbjct: 2065 atgtctgatattgctctagcttgtgcagacatgtacagtaatttgaggtccatagc 2120
Score = 83.8 bits (42), Expect = 4e-15
Identities = 128/156 (82%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 297 gccgttgcagcgggccgcgactatgccagagatgaagatcccgaagccg---gagtcgaa 353
|||||||||||| || |||| ||||| ||||||||||||| ||||||| ||| ||||
Sbjct: 303 gccgttgcagcgtgcggcgagcatgccggagatgaagatccagaagccgccagaggcgaa 362
Query: 354 gccggtgggacctaccataatggaagaggaggagatggattttgaagcacacgataatga 413
| ||||||| ||||| ||| |||| ||||| || | || |||||||| || ||||||||
Sbjct: 363 gtcggtgggtcctactatattggaggaggaagaactagagtttgaagctcaagataatga 422
Query: 414 gaaattgatcaggaagcgtagtagtagtaacagagg 449
|||||||| || ||| | ||||||||||| |||||
Sbjct: 423 gaaattgacgagaaagagaagtagtagtaatagagg 458
>29794.m003464 conserved hypothetical protein
Length = 2187
Score = 85.7 bits (43), Expect = 1e-15
Identities = 220/279 (78%)
Strand = Plus / Plus
Query: 888 agagcttgatgatcacttcttgaaggcttctgaaagtgctcatgaggtttccaagatgct 947
|||| |||||||||| || | ||||||||||| | ||| || |||||||||||||||||
Sbjct: 876 agagattgatgatcattttctcaaggcttctgagaatgcccaggaggtttccaagatgct 935
Query: 948 ggaggccacacgattacattatcactctaatttcgcagataataggggacatattgatca 1007
|||||||| || || ||||| ||||| ||||| || || ||||| ||| || | |||||
Sbjct: 936 tgaggccactcgtttgcattaccactccaattttgctgacaatagaggatatgtggatca 995
Query: 1008 ctctaaaagagtgatgcgagttattacatggaatcgatcatttaaaggaattcctagtgt 1067
||| ||||| ||||| ||||| ||||||||||| ||||| | ||| | || | ||
Sbjct: 996 ttctgctagagttatgcgtgttatcacatggaatcggtcattcagaggtgtacccaatgg 1055
Query: 1068 tgatgatggtaaagatgattttgatacagaggagcaggaaactcatgctactgtgttgga 1127
||| | ||| || ||||| ||||| | || || | || ||||||||||| || |||||
Sbjct: 1056 tgaaggtggcaaggatgaacttgattctgaagattatgagactcatgctacggttttgga 1115
Query: 1128 taagatgctagcttgggaaaagaagctttatgatgaagt 1166
|||| || |||| ||||||||||| || || ||||||||
Sbjct: 1116 taagttgttagcatgggaaaagaaactctacgatgaagt 1154