Jatropha Genome Database
- JcCA0006671.50
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0006671.50 + phase: 0
(603 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30146.m003621 rab5, putative 422 e-117
29912.m005538 rab5, putative 74 1e-12
30125.m001252 rab5, putative 56 3e-07
29745.m000376 rab5, putative 54 1e-06
>30146.m003621 rab5, putative
Length = 486
Score = 422 bits (213), Expect = e-117
Identities = 357/405 (88%)
Strand = Plus / Plus
Query: 5 caaaacctggcaataggatcattcaagccaagctggtgcttttgggggatatgggaactg 64
|||| |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 5 caaagcctggcaacaggatcattcaagccaagctggtgcttttgggggacgtggggactg 64
Query: 65 gaaaaaccagtttggtactaagatttgtcaagggtcaattcttcgatcatcaggaaccaa 124
| |||||||||||||| |||||||||||||||| || ||||| ||||| ||||||||||
Sbjct: 65 ggaaaaccagtttggtcttaagatttgtcaagggccagttctttgatcaccaggaaccaa 124
Query: 125 ccataggagcagcatttttcacacaaatattatcattagctgaagcaactctcaaatttg 184
| ||||||||||||||||||||||| || ||||| ||||||||||||||| | || ||||
Sbjct: 125 ctataggagcagcatttttcacacagattttatcgttagctgaagcaactgtgaagtttg 184
Query: 185 atatatgggacacagcaggacaagaaagataccatagcttggctcctatgtattatcgcg 244
||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||
Sbjct: 185 atatatgggacacagcaggtcaagaaagataccatagcttggctccaatgtactatcgcg 244
Query: 245 gggcagcagctgcaatacttgtctatgacatctcaagcgttgatacattcaccagagcca 304
| |||||||| ||| || |||| ||||| ||||||||| | |||||||||| ||||||
Sbjct: 245 gtgcagcagcagcattagttgtgtatgatatctcaagcatggatacattcattagagccc 304
Query: 305 agaaatgggttcaagaactacaaagacaaggaaatcctaatatgattatggcattagtgg 364
| || |||||||||||||| |||||||||||||| || ||| || |||||||||| ||||
Sbjct: 305 aaaagtgggttcaagaactgcaaagacaaggaaacccaaatttggttatggcattggtgg 364
Query: 365 caaacaaatctgatctagacgccgagagagaagtgcagaatgagg 409
||||||||| ||| || ||| | ||||||| |||||||||||||
Sbjct: 365 caaacaaatttgacctggactcgaagagagaggtgcagaatgagg 409
Score = 56.0 bits (28), Expect = 3e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 415 gatcaatttgctcaggagaatgggatgttttt 446
|||||||||||||| |||||||||||||||||
Sbjct: 450 gatcaatttgctcaagagaatgggatgttttt 481
>29912.m005538 rab5, putative
Length = 600
Score = 73.8 bits (37), Expect = 1e-12
Identities = 166/209 (79%)
Strand = Plus / Plus
Query: 28 caagccaagctggtgcttttgggggatatgggaactggaaaaaccagtttggtactaaga 87
|||||||||||||| ||| | ||||| |||||||||||||| || ||| |||| | |||
Sbjct: 28 caagccaagctggtacttcttggggacatgggaactggaaagacaagtctggttttgaga 87
Query: 88 tttgtcaagggtcaattcttcgatcatcaggaaccaaccataggagcagcatttttcaca 147
||||||||||| ||||| || ||| |||||| | || || ||||| || ||||||||
Sbjct: 88 tttgtcaagggccaattttttgatttccaggaatcgacaattggagctgcctttttcact 147
Query: 148 caaatattatcattagctgaagcaactctcaaatttgatatatgggacacagcaggacaa 207
|| | || || | ||| || ||| | || ||||||||||||||||||||||| ||
Sbjct: 148 caggttttgtcgctgaatgaggccactataaagtttgatatatgggacacagcagggcag 207
Query: 208 gaaagataccatagcttggctcctatgta 236
|| |||| |||||||||||||| |||||
Sbjct: 208 gagcgatatcatagcttggctccgatgta 236
>30125.m001252 rab5, putative
Length = 678
Score = 56.0 bits (28), Expect = 3e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 169 gcaactctcaaatttgatatatgggacacagcaggacaagaaagataccatagcttggct 228
|||||| | |||||||| || |||||||||||||| || || || || || |||||||||
Sbjct: 169 gcaactgtaaaatttgagatttgggacacagcaggtcaggagaggtatcacagcttggct 228
Query: 229 cctatgta 236
||||||||
Sbjct: 229 cctatgta 236
>29745.m000376 rab5, putative
Length = 675
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 178 aaatttgatatatgggacacagcaggacaagaaag 212
|||||||| ||||||||||| ||||||||||||||
Sbjct: 250 aaatttgaaatatgggacactgcaggacaagaaag 284