Jatropha Genome Database
- JcCA0003732.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0003732.10 + phase: 1 /pseudo/partial
(1304 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29976.m000497 transcription factor, putative 680 0.0
29915.m000469 transcription factor, putative 101 1e-20
>29976.m000497 transcription factor, putative
Length = 2586
Score = 680 bits (343), Expect = 0.0
Identities = 668/775 (86%), Gaps = 1/775 (0%)
Strand = Plus / Plus
Query: 150 agtgagaatcacggaggcagggtaaatggggatgcactgctgcaaccaacgtcagagaag 209
||||||||| | ||||||||| |||||||||||||| ||| |||| |||| ||||||||
Sbjct: 1408 agtgagaattatggaggcaggataaatggggatgcagtgcagcaatcaacagcagagaag 1467
Query: 210 aaaagaactcgaaatattggacctaagaataagcgattactcatgaatagtgaagatgct 269
|| || ||||| ||||||||||| || | ||| ||||| | ||| || ||||||||||
Sbjct: 1468 aagaggactcgtaatattggacccaaaagcaagagattattgatgcattctgaagatgct 1527
Query: 270 ttggagctgcgacttacatgggaagaagcgcaggacttgcttcgcccaccccctagtgta 329
|||||||| |||||||||||||||||||| || ||||||||||| |||||||| |||||
Sbjct: 1528 ttggagcttcgacttacatgggaagaagcacaagacttgcttcgtccacccccaagtgtc 1587
Query: 330 aagccgagcattgttgctattgaggaccatgaatttgaagaatatgattgagccaccagt 389
||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 1588 aagccaagcattgtcactattgaggaccatgaatttgaagaatatgat-gagcctccagt 1646
Query: 390 ttttgggaagaggacagtatttgctgatcaaccatctgggggacaggagcaatgggctca 449
|| ||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||
Sbjct: 1647 attcgggaagaggaccatatttgcagatcgaccatctgggggacaggagcaatgggccca 1706
Query: 450 atgtgatgattgctccaaatggcgaaaattgccgcaagatgctcttctccctccgaagtg 509
||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||
Sbjct: 1707 atgtgatgattgctccaaatggcgaaaattgcccgaggatgctcttctccctccaaagtg 1766
Query: 510 gacctgttcagacaatgtttgggattcaagcaggtgttcgtgttcggcaccagaggagat 569
|||||||| ||| ||||||||||| || ||||||||| | ||||| ||||||||||||||
Sbjct: 1767 gacctgtttagataatgtttgggactctagcaggtgtacatgttctgcaccagaggagat 1826
Query: 570 gagtctgaaggatttagattatcttctgagagtgagcaaagatttgaagaagcgaaggat 629
|| || |||||||| ||| ||||||||| | |||||||||||| |||| ||| |||||
Sbjct: 1827 gaatccaaaggatttggatactcttctgagggggagcaaagatttcaagaggcgtaggat 1886
Query: 630 tgtagagagacgcaaggcatcacctgaatgtgagccttctggattagatgcattagctag 689
| ||| || | ||| |||| ||||||||||||| ||||| |||||||| |||||||
Sbjct: 1887 ggcagacaggcataagccatcctctgaatgtgagccatctggcttagatgctctagctag 1946
Query: 690 tgctgctgttttaggcgacaatatttgtgatacaggtgagccatcagttggagatacgac 749
|||||| || ||||| || ||||| |||| |||||||||||||||||||| || ||
Sbjct: 1947 tgctgcagtattaggagataatataggtgacttaggtgagccatcagttggagccactac 2006
Query: 750 aaagcatccaaggcaccgtcctggttgtacttgcattgtctgcattcaacctcccagtgg 809
||||||||| ||||||| ||||| |||||||||||||| |||||||| || || |||||
Sbjct: 2007 aaagcatcctcggcaccgccctggctgtacttgcattgtatgcattcagccaccaagtgg 2066
Query: 810 taagggcaagcacaaacccacatgtacatgcaatgtgtgcatgactgtaaagcatcgctt 869
||||||||| |||||||| ||||| |||||||||||||||||||| |||||| |||||
Sbjct: 2067 taagggcaaacacaaaccgacatgcacatgcaatgtgtgcatgacagtaaagaggcgctt 2126
Query: 870 caaaacactcgtgctacgtaagaagaaacgacaatcagaacgtgaagcggaaatt 924
||||| ||| |||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 2127 taaaaccctcatgctgcgtaagaagaaacgtcaatcagaacgagaagcggaaatt 2181
Score = 184 bits (93), Expect = 9e-46
Identities = 219/261 (83%)
Strand = Plus / Plus
Query: 1044 caaatagacttaaattgtcatcctaacggcgaggatatacagatggacatcccaggattg 1103
||||||||| ||||| ||||||||||| ||||||| || ||| ||||||| | |||||||
Sbjct: 2323 caaatagacctaaatagtcatcctaaccgcgaggacatgcagctggacatacaaggattg 2382
Query: 1104 agcataatggaccttgctgatgcagccaacatgccatttgacaattatatcaaggaaaat 1163
||||| ||| |||||||| |||||||||| | ||||||||||||||| ||||| |||||
Sbjct: 2383 agcatgatgaaccttgctaatgcagccaatctaccatttgacaattatgtcaagcaaaat 2442
Query: 1164 gggctttcaagcttgatgtgtgaccggcaggcgagcttgggatcctgttcccattcacaa 1223
|||||| || ||| |||| || |||||||||||| |||| ||||||| |||||||||
Sbjct: 2443 gggcttgcagacttcttgtgcgagcggcaggcgagcatgggttcctgtttgcattcacaa 2502
Query: 1224 tctgatggtgagaatctgagacggctgtctgatgaagcatttctggcatctatcggttgg 1283
| ||||||||| | ||| |||||||||||||||||||||||| || ||| |||| |||
Sbjct: 2503 aataatggtgagagtttgatacggctgtctgatgaagcatttcttgcgtctgtcggctgg 2562
Query: 1284 gatcgtgagagtagaggtgat 1304
| | ||| |||| |||||||
Sbjct: 2563 aaccatgaaagtaaaggtgat 2583
Score = 135 bits (68), Expect = 7e-31
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 1 taacttttagccggatagatcctggaggcaaacttgtcatgggatttcgcaaggctacaa 60
|||| |||||||||||||||||||| ||||||||||| |||||||||||||||| ||||
Sbjct: 1226 taacatttagccggatagatcctggtggcaaacttgttgtgggatttcgcaaggcaacaa 1285
Query: 61 acaactctttagatacacaggatgcccaaacatctacaattcctaatagtgctgct 116
|||| || || || ||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 1286 acaattccttggacacacaggatgcccaaacatctgcacttcctaatggtgctgct 1341
>29915.m000469 transcription factor, putative
Length = 2676
Score = 101 bits (51), Expect = 1e-20
Identities = 118/139 (84%), Gaps = 1/139 (0%)
Strand = Plus / Plus
Query: 263 agatgctttggagctgcgacttacatgggaagaagcgcaggacttgcttcgcccaccccc 322
||||||| ||||||| ||| ||||||||||| || |||||||| || |||||||| ||
Sbjct: 1533 agatgctctggagctcaaactgacatgggaagaggcacaggactttctccgcccaccacc 1592
Query: 323 tagtgtaaagccgagcattgttgctattgaggaccatgaatttgaagaatatgattgagc 382
| ||||||||| |||||||| |||||||||| ||||| |||||||||||||| || |
Sbjct: 1593 aactgtaaagcctagcattgtcactattgaggatcatgattttgaagaatatga-ggaac 1651
Query: 383 caccagtttttgggaagag 401
| |||||||||||||||||
Sbjct: 1652 ctccagtttttgggaagag 1670
Score = 61.9 bits (31), Expect = 9e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 784 attgtctgcattcaacctcccagtggtaagggcaagcacaaacccacatgtacatgcaat 843
||||| ||||||||||| || ||||||||||| |||||||| || |||||||||| ||
Sbjct: 2050 attgtgtgcattcaacccccaagtggtaagggaaagcacaagccttcatgtacatgtaac 2109
Query: 844 gtgtgcatgac 854
|| ||||||||
Sbjct: 2110 gtttgcatgac 2120