Jatropha Genome Database

JcCA0003592.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0003592.10 + phase: 1 /partial
         (296 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29827.m002559 glycine cleavage system h protein, putative             281   1e-75

>29827.m002559 glycine cleavage system h protein, putative
          Length = 498

 Score =  281 bits (142), Expect = 1e-75
 Identities = 254/290 (87%), Gaps = 1/290 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   tgggagaagtagtgtttgtggatctaccagaacctggagttgcagtcactcaagggaaga 67
           |||||||||||||||||||||||||||||||| ||||   | |||| |||||||| ||||
Sbjct: 206 tgggagaagtagtgtttgtggatctaccagaagctggtacttcagttactcaaggcaaga 265

                                                                       
Query: 68  gctttgg-gcagtggaaagtgtaaaagcaacaagtgatgtcaattctcccatctccggtg 126
           ||||||| || ||||||||||| ||||||||||||||||| || ||||| ||||| ||||
Sbjct: 266 gctttggagctgtggaaagtgtgaaagcaacaagtgatgttaactctccaatctctggtg 325

                                                                       
Query: 127 agattgttgaggttaattccaagcttagtgaagcacctggggcaattaattcaagtccat 186
           || ||||||| |||||  | |||||||  |||| ||||||  | ||||||||||||||||
Sbjct: 326 aggttgttgaagttaacacaaagcttaccgaaggacctggctcgattaattcaagtccat 385

                                                                       
Query: 187 atgaagaaggatggatgatcaaagtgaagccaagtaacccatcagaattaggatccttat 246
           |||||||||||||||||||||||||||||||||  || |||||||||||||  |||||| 
Sbjct: 386 atgaagaaggatggatgatcaaagtgaagccaaacaatccatcagaattagagtccttaa 445

                                                             
Query: 247 tggatgcaaaggcatatacaaaattctgtgaggaagaagatgctgctcat 296
           ||| | |||||| ||| ||||||||||| |||||||||||||||||||||
Sbjct: 446 tgggtccaaaggaatacacaaaattctgcgaggaagaagatgctgctcat 495