Jatropha Genome Database
- JcCA0003212.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0003212.30 + phase: 0 /partial
(523 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008873 leucine rich repeat receptor kinase, putative 406 e-113
29813.m001463 leucine rich repeat receptor kinase, putative 230 7e-60
>30174.m008873 leucine rich repeat receptor kinase, putative
Length = 1884
Score = 406 bits (205), Expect = e-113
Identities = 397/461 (86%)
Strand = Plus / Plus
Query: 61 gaactcgaactcctcatgcaaatcaaggcctccctcgacccacaaaaccggttcttgacc 120
||||| |||||||| ||||||||||||||| || |||||| | |||||||||||||||
Sbjct: 70 gaacttgaactcctaatgcaaatcaaggccagtcttgacccaaataaccggttcttgacc 129
Query: 121 tcctggcagcataacgcagacccttgtggtgggtcttttgagggcgtggcttgcaatgag 180
|| ||| | | ||| | ||||||| |||||||||||||||||||||||||||||| |
Sbjct: 130 tcatgggaacccaacactaacccttgcagtgggtcttttgagggcgtggcttgcaatggg 189
Query: 181 gaaggacgtgtggctaatatttctctccaggggaagggtctgtccggtcggatacctgcg 240
|||| || |||||||| ||||| ||||| |||||||| || |||| |||||| ||
Sbjct: 190 caaggcaacgtagctaatatatctcttcagggaaagggtctttctggtcagataccggct 249
Query: 241 gctttaggtgggcttaagagcttgactggtttgtatctgcatttcaatgcactgactgga 300
||| |||||||||| ||||| ||||||||||||||||| ||||| |||||| ||| |||
Sbjct: 250 gctctaggtgggctcaagagtttgactggtttgtatctacattttaatgcattgaatggg 309
Query: 301 gatattcccaaagagattgctcagcttagtcaactgagtgatttgtatctcaatgtcaat 360
|| || || |||||||||||| |||||| | |||| |||||||||||||||||||| |||
Sbjct: 310 gagataccaaaagagattgctgagcttactgaacttagtgatttgtatctcaatgtgaat 369
Query: 361 aatctgtctgggcagattccacatcagattggcaacatgtctaatcttcaagttttgcag 420
||||| |||||| | |||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 370 aatctatctggggaaattccaagtcagattggtaacatgtctaatcttcaagttttgcag 429
Query: 421 ctgtgttacaataagttgactgggagtataccaacgcaacttggatctctaaagaaactt 480
||||||||||||||| ||||||||||||||||||| ||| | |||||||||| ||||||
Sbjct: 430 ctgtgttacaataagctgactgggagtataccaacacaattgggatctctaaggaaacta 489
Query: 481 aatgtccttgctctacaatataaccagcttactagtgcaat 521
||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 490 aatgtccttgctctacagtataatcagctaactagtgcaat 530
>29813.m001463 leucine rich repeat receptor kinase, putative
Length = 1947
Score = 230 bits (116), Expect = 7e-60
Identities = 188/212 (88%)
Strand = Plus / Plus
Query: 310 aaagagattgctcagcttagtcaactgagtgatttgtatctcaatgtcaataatctgtct 369
||||||||||||||||| | | |||| ||||||||||||| |||||| |||||||| |||
Sbjct: 268 aaagagattgctcagctaactgaacttagtgatttgtatcccaatgtgaataatctatct 327
Query: 370 gggcagattccacatcagattggcaacatgtctaatcttcaagttttgcagctgtgttac 429
| | |||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 328 gccgaaattccaagacagattggtaacatgtctaatcttcaagttttgcagctgtgttac 387
Query: 430 aataagttgactgggagtataccaacgcaacttggatctctaaagaaacttaatgtcctt 489
|||||| ||||||||||||||||||| ||| | |||||||||| |||||| |||||||||
Sbjct: 388 aataagctgactgggagtataccaacacaattgggatctctaaggaaactaaatgtcctt 447
Query: 490 gctctacaatataaccagcttactagtgcaat 521
|||||||| ||||| ||||| |||||||||||
Sbjct: 448 gctctacagtataatcagctaactagtgcaat 479
Score = 54.0 bits (27), Expect = 9e-07
Identities = 88/107 (82%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 162 gggcgtggcttgcaatgaggaaggacgtgtggctaatatttctctccaggggaagggtct 221
||||||||||||||||| | |||| || |||||||| ||||| ||||| ||||||||
Sbjct: 153 gggcgtggcttgcaatgggcaaggcaacgtagctaatatatctcttcagggaaagggtct 212
Query: 222 gtccggtcgga-tacctgcggctttaggtgggcttaagagcttgact 267
|| |||| || |||| || ||| |||||||||| ||||| ||||||
Sbjct: 213 ttctggtcagattaccggctgctctaggtgggctcaagagtttgact 259