Jatropha Genome Database
- JcCA0000831.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0000831.30 + phase: 0
(1509 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30063.m001448 ATP synthase beta subunit, putative 2044 0.0
29923.m000792 ATP synthase beta subunit, putative 745 0.0
29154.m000208 ATP synthase beta subunit, putative 527 e-149
30009.m000830 ATP synthase beta subunit, putative 274 1e-72
30189.m001651 ATP synthase beta subunit, putative 167 2e-40
46608.m000022 ATP synthase beta subunit, putative 96 7e-19
29965.m000025 conserved hypothetical protein 60 4e-08
>30063.m001448 ATP synthase beta subunit, putative
Length = 1275
Score = 2044 bits (1031), Expect = 0.0
Identities = 1210/1272 (95%)
Strand = Plus / Plus
Query: 1 atgagaatcaatcctactacttctggtccgggagttcccgcgcttgnnnnnnngaacctg 60
|||||||||||||||||||||||||||||||||||| || | |||| |||||||
Sbjct: 1 atgagaatcaatcctactacttctggtccgggagtttccacacttgaaaaaaagaacctg 60
Query: 61 gggcgtatcgctcaaatcattgggccagtactagatgtagctttttccccgggcaagatg 120
||||| ||| |||||||||||||||| || ||||||||||||||| ||||||| ||||||
Sbjct: 61 gggcgcatcactcaaatcattgggccggtgctagatgtagcttttcccccgggaaagatg 120
Query: 121 cctaatatttacaacgctctggtagttaagggtcgagatactgtcgggcaagaaattaat 180
|||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||
Sbjct: 121 cctaatatttacaacgctctagtagttaagggtcgggatactgttggtcaagaaattaat 180
Query: 181 gtgacttgtgaagtacaacaattattaggaaataatcgagttcgggctgtagctatgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgacttgtgaagtacaacaattattaggaaataatcgagttcgggctgtagctatgagt 240
Query: 241 gctacagatggtctaacgcgaggaatggaagtgattgacacaggagctcctctaagtgtt 300
|||||||| ||||||| | |||||||||||||||||||||| |||| |||||| ||||||
Sbjct: 241 gctacagacggtctaatgagaggaatggaagtgattgacacgggaggtcctctcagtgtt 300
Query: 301 ccagttggtggggcgactctaggacgaattttcaacgtgcttggagaacctgttgatgat 360
||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagtcggcggagcgactctaggacgaattttcaacgtgcttggagaacctgttgatgat 360
Query: 361 ttaggtcctgtagatactcgcgcaacatcacctattcatagatctgcacctgcttttata 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 361 ttaggtcctgtagatactcgcgcaacatcccctattcatagatctgcacctgcctttata 420
Query: 421 caattagatacaaaattatctatttttgaaacaggaattaaagtagtagatcttttagcc 480
|| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 421 cagttagatacaaaattatctatttttgagacaggaattaaagtagtagatctgttagcc 480
Query: 481 ccttatcgccgtggaggaaaaatcggactattcgggggagctggagtgggtaaaacagta 540
|||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 481 ccttatcgacgtggaggaaaaatcagactattcgggggagctggagtaggtaaaacagta 540
Query: 541 cttattatggaattaatcaacaacatcgcgaaagctcatggaggcgtatccgtatttggc 600
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 541 cttattatggaattaatcaacaacattgcgaaagctcatgggggcgtatccgtatttggc 600
Query: 601 ggagtaggcgaacgaactcgtgaaggaaatgatctttacatggaaatgaaagaatctgga 660
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 601 ggagtaggcgaacgtactcgtgaaggaaatgatctttacatggaaatgaaaaaatctgga 660
Query: 661 gtaattaatcaagaaaatattgcagaatcaaaagtggctctagtctatggtcagatgaac 720
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 661 gtaattaatgaagaaaatattgcagaatcaaaagtagctctagtctatggtcagatgaac 720
Query: 721 gaaccgccgggagctcgtatgagagttggtttgactgccctaactatggcggaatatttc 780
||||| |||||||||||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 721 gaaccctcgggagctcgtatgagagttggcttaactgccctaactatggcgaaatatttc 780
Query: 781 cgagatgttaatgaacaagacgtacttctatttatcgacaatatcttccgtttcgtccaa 840
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cgagatgttaatgaacaggacgtacttctatttatcgacaatatcttccgtttcgtccaa 840
Query: 841 gcaggatccgaagtatccgccttattgggtagaatgccttctgctgtgggttatcaacct 900
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 841 gcaggatccgaagtatccgccttattaggtagaatgccttccgctgtgggttatcaacct 900
Query: 901 acccttagtaccgaaatgggttctttacaagaaagaattacttccaccaaagaggggtcc 960
||||||||||||||||||||||||||||||||| |||||||||| || ||||| ||||||
Sbjct: 901 acccttagtaccgaaatgggttctttacaagaacgaattacttctacaaaagaagggtcc 960
Query: 961 ataacttctattcaagcagtttatgtacctgcggacgatttgactgaccctgctcctgcc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ataacttctattcaagcagtttatgtacctgcggacgatttgactgaccctgctcctgcc 1020
Query: 1021 acgacatttgcacatttagatgcgactactgtactatcaagaggattagctgctaaaggt 1080
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1021 acgacatttgcacatttagatgctactactgtactatcaagaggattagctgctaaaggg 1080
Query: 1081 atctatccagcagtagatcctttagattcaacatcaactatgctccaacctcagatcgtt 1140
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1081 atctatccagcagtagatcctttagattcaacgtcaactatgctccaacctcagatcgtt 1140
Query: 1141 ggtgaggaacattatgaaactgcgcaaagagttaagcaaactttacaacgttacaaagaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggtgaggaacattatgaaactgcgcaaagagttaagcaaactttacaacgttacaaagaa 1200
Query: 1201 cttcaggacattatagctatccttgggctggacgaattatccgaagaggatcgtttaact 1260
||||| ||||||||||||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 1201 cttcaagacattatagctatccttgggttagacgaattatccgaagaggatcgcttaact 1260
Query: 1261 gtagcaagagca 1272
||||||||||||
Sbjct: 1261 gtagcaagagca 1272
>29923.m000792 ATP synthase beta subunit, putative
Length = 798
Score = 745 bits (376), Expect = 0.0
Identities = 433/452 (95%)
Strand = Plus / Plus
Query: 845 gatccgaagtatccgccttattgggtagaatgccttctgctgtgggttatcaacctaccc 904
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 344 gatccgaagtatccgccttattaggtagaatgccttttgctgtgggttatcaacctaccc 403
Query: 905 ttagtaccgaaatgggttctttacaagaaagaattacttccaccaaagaggggtccataa 964
|||||| |||||||||||||||||||||| |||||||||| | ||||| ||||||||||
Sbjct: 404 ttagtatcgaaatgggttctttacaagaacgaattacttctataaaagaagggtccataa 463
Query: 965 cttctattcaagcagtttatgtacctgcggacgatttgactgaccctgctcctgccacga 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cttctattcaagcagtttatgtacctgcggacgatttgactgaccctgctcctgccacga 523
Query: 1025 catttgcacatttagatgcgactactgtactatcaagaggattagctgctaaaggtatct 1084
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 524 catttgcacatttagatgctactattgtactatcaagaggattagctgctaaaggtatct 583
Query: 1085 atccagcagtagatcctttagattcaacatcaactatgctccaacctcagatcgttggtg 1144
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 584 atccagcagtagatcctttagattcaacgtcaactatgctccaacctcagatcgttggtg 643
Query: 1145 aggaacattatgaaactgcgcaaagagttaagcaaactttacaacgttacaaagaacttc 1204
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aggaacattatgaaactacgcaaagagttaagcaaactttacaacgttacaaagaacttc 703
Query: 1205 aggacattatagctatccttgggctggacgaattatccgaagaggatcgtttaactgtag 1264
| ||||||||||||||||||||| | ||||| ||||| |||||||||| ||||||||||
Sbjct: 704 aagacattatagctatccttgggttagacgagttatcaaaagaggatcgcttaactgtag 763
Query: 1265 caagagcacgaaaaattgagcgtttcttatca 1296
||||||||||||||||||||||||||||||||
Sbjct: 764 caagagcacgaaaaattgagcgtttcttatca 795
Score = 412 bits (208), Expect = e-114
Identities = 250/264 (94%)
Strand = Plus / Plus
Query: 445 tttgaaacaggaattaaagtagtagatcttttagccccttatcgccgtggaggaaaaatc 504
||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 79 tttgagacaggaattaaagtagtagatctgttagccccttatcgtcgtggaggaaaaatc 138
Query: 505 ggactattcgggggagctggagtgggtaaaacagtacttattatggaattaatcaacaac 564
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 agactattcgggggagctggagtgggtaaaacagtacttattatggaattaatcaacaac 198
Query: 565 atcgcgaaagctcatggaggcgtatccgtatttggcggagtaggcgaacgaactcgtgaa 624
|| | |||||||||||| ||||||||||||||||||||||| |||||||| |||| ||||
Sbjct: 199 attgtgaaagctcatgggggcgtatccgtatttggcggagttggcgaacgtactcatgaa 258
Query: 625 ggaaatgatctttacatggaaatgaaagaatctggagtaattaatcaagaaaatattgca 684
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 259 ggaaatgatctttacatggaaatgaaagaatctggagtaattaatgaagaaaatattata 318
Query: 685 gaatcaaaagtggctctagtctat 708
||||||||||| ||||||||||||
Sbjct: 319 gaatcaaaagtagctctagtctat 342
Score = 111 bits (56), Expect = 1e-23
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 338 tgcttggagaacctgttgatgatttaggtcctgtagatactcgcgcaacatcacctattc 397
||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||
Sbjct: 2 tgcttggagaacctgttgatgatttagatcctatagatactcgcgtaacatcctctattc 61
Query: 398 atagatctgcacctgc 413
||||||||||||||||
Sbjct: 62 atagatctgcacctgc 77
>29154.m000208 ATP synthase beta subunit, putative
Length = 378
Score = 527 bits (266), Expect = e-149
Identities = 332/354 (93%)
Strand = Plus / Plus
Query: 1120 atgctccaacctcagatcgttggtgaggaacattatgaaactgcgcaaagagttaagcaa 1179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 atgctccaacctcagatcgttggtaaggaacattatgaaactgcgcaaagagttaagcaa 60
Query: 1180 actttacaacgttacaaagaacttcaggacattatagctatccttgggctggacgaatta 1239
|||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| |
Sbjct: 61 actttacaacgttacaaagaacttcaagacattatagctatccttgggttagacgaatca 120
Query: 1240 tccgaagaggatcgtttaactgtagcaagagcacgaaaaattgagcgtttcttatcacaa 1299
|||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 121 tccgaagaggatcgcttaactgtagcaagagtacaaaaaattgagcgtttcttatcacaa 180
Query: 1300 ccctttttcgtagcagaagtatttaccggttctccgggtaaatatgtcggtctagcagaa 1359
|||||||| |||||||||||||||| |||||||||| |||||||||||| |||||||
Sbjct: 181 cccttttttatagcagaagtatttacgggttctccggaaaaatatgtcggtttagcagat 240
Query: 1360 actattagagggtttaaattgatcctttccggagaattagatagtctccctgaacaggcc 1419
||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 241 actattagaggatttaaattgatcctttctggagaattagatagtctacctgagcaggcc 300
Query: 1420 ttttatttggtaggtaatattgatgaagctactgcgaaggctacaaacttagaa 1473
||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 301 ttttatttggtaggtaatattgatgaagctactgcaaaggctacgaatttagaa 354
>30009.m000830 ATP synthase beta subunit, putative
Length = 195
Score = 274 bits (138), Expect = 1e-72
Identities = 177/190 (93%)
Strand = Plus / Plus
Query: 235 atgagtgctacagatggtctaacgcgaggaatggaagtgattgacacaggagctcctcta 294
|||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 1 atgagtgctacagacggtctaataagaggaatggaagtgattgacacaggaggtcctctc 60
Query: 295 agtgttccagttggtggggcgactctaggacgaattttcaacgtgcttggagaacctgtt 354
||||||||||| || || ||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 61 agtgttccagtcggcggagcgactctaggacgacttttcaacgtgcttgaagaacctgtt 120
Query: 355 gatgatttaggtcctgtagatactcgcgcaacatcacctattcatagatctgcacctgct 414
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 gatgatttaggtcctgtagatactcgcgcaacatcccctattcatagatctgcacctgcc 180
Query: 415 tttatacaat 424
||||||||||
Sbjct: 181 tttatacaat 190
>30189.m001651 ATP synthase beta subunit, putative
Length = 177
Score = 167 bits (84), Expect = 2e-40
Identities = 99/104 (95%)
Strand = Plus / Plus
Query: 547 atggaattaatcaacaacatcgcgaaagctcatggaggcgtatccgtatttggcggagta 606
|||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||
Sbjct: 1 atggaattaatcaacaacattgcgaaagctcatgggggcgtatccgttattggcggagta 60
Query: 607 ggcgaacgaactcgtgaaggaaatgatctttacatggaaatgaa 650
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcgaacgtactcgtgaaggaaatgatctttacatggaaatgaa 104
>46608.m000022 ATP synthase beta subunit, putative
Length = 330
Score = 95.6 bits (48), Expect = 7e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 692 aagtggctctagtctatggtcagatgaacgaaccgccgggagctcgtatgagagttggtt 751
|||| |||||||| |||||||||||||| ||||| |||||||||||| ||||||||||||
Sbjct: 158 aagtagctctagtatatggtcagatgaatgaaccaccgggagctcgtttgagagttggtt 217
Query: 752 tgactgcc 759
||||||||
Sbjct: 218 tgactgcc 225
>29965.m000025 conserved hypothetical protein
Length = 225
Score = 60.0 bits (30), Expect = 4e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 307 ggtggggcgactctaggacgaattttcaacgtgcttggagaacctgttgatgatttag 364
||||| |||||||| |||||||||||||| ||||||||||| | | ||||| ||||||
Sbjct: 163 ggtggagcgactcttggacgaattttcaatgtgcttggagagcttattgataatttag 220