Jatropha Genome Database

JcCA0000051.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0000051.30 + phase: 2 /pseudo/partial
         (1087 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27985.m000842 kinase, putative                                         74   2e-12

>27985.m000842 kinase, putative
          Length = 2091

 Score = 73.8 bits (37), Expect = 2e-12
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                        
Query: 528  gttgcttctgctcttacgtatcgtcacgaagaatgcaagagacaaatcattcacagagat 587
            ||||||||||||||| ||||||  ||||| ||| |  | || || || ||||| ||||||
Sbjct: 1450 gttgcttctgctctttcgtatctacacgaggaaagtgaaaggcagataattcatagagat 1509

                                                     
Query: 588  gtgaagccctgcaatataatgcttgatgcagatttcaatgc 628
            || ||| ||||||||||||||||||||| ||| ||||||||
Sbjct: 1510 gtcaagacctgcaatataatgcttgatgaagaattcaatgc 1550



 Score = 71.9 bits (36), Expect = 8e-12
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                        
Query: 313  cgcaatcctttcaccactgagtttgcaacaatggtgggttgcttaaggcacaagaacttg 372
            |||||||| ||||  ||||||||||||||||| |||||||||||||  || || ||||||
Sbjct: 1240 cgcaatccattcataactgagtttgcaacaattgtgggttgcttaaaacataataacttg 1299

                        
Query: 373  gttcagcttcaa 384
            ||||| ||||||
Sbjct: 1300 gttcaacttcaa 1311