Jatropha Genome Database

JHL02J17r.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JHL02J17r.10 + phase: 2 /partial/short
         (121 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30072.m000942 replication factor C / DNA polymerase III gamma-ta...    82   8e-16

>30072.m000942 replication factor C / DNA polymerase III gamma-tau
           subunit, putative
          Length = 1029

 Score = 81.8 bits (41), Expect = 8e-16
 Identities = 65/73 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcttcaaaggtttctgaggcaattaggtcacggtgtctcaatatgcgaataaatgcacc 60
           ||||||||||||| |||| |||||| |||| || ||||| ||| ||||||||| ||||||
Sbjct: 510 ttcttcaaaggttactgaagcaattcggtctcgttgtctgaatgtgcgaataagtgcacc 569

                        
Query: 61  ttcagaggaacag 73
           |||||||||||||
Sbjct: 570 ttcagaggaacag 582