Jatropha Genome Database
- JcSR152930r.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcSR152930r.10 + phase: 2 /TE/partial
(124 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29608.m000209 conserved hypothetical protein 80 3e-16
30128.m009031 conserved hypothetical protein 77 2e-15
29607.m000244 hypothetical protein 74 1e-14
28657.m000384 conserved hypothetical protein 72 7e-14
29738.m001015 hypothetical protein 66 4e-12
29888.m000323 conserved hypothetical protein 60 2e-10
29642.m000286 conserved hypothetical protein 60 2e-10
29983.m003210 conserved hypothetical protein 54 1e-08
29790.m000818 conserved hypothetical protein 49 5e-07
29661.m000941 hypothetical protein 47 3e-06
29813.m001504 nucleic acid binding protein, putative 45 6e-06
>29608.m000209 conserved hypothetical protein
Length = 273
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 61/100 (61%)
Query: 4 GSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDY 63
G+F A +G SG P+VAE +++RE L W++ L L + E+DCL LVNAV ++
Sbjct: 163 GTFRAATNGLISGPLDPQVAEALSLREDLCWVKGLDLNYVVSESDCLTLVNAVNKVGVNS 222
Query: 64 SDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAA 103
S + L++GD + F+ + + I +VKR N+ AH LAR
Sbjct: 223 SLFGLLIGDCRSFLKEMNHAHIVFVKRFGNRVAHLLARVT 262
>30128.m009031 conserved hypothetical protein
Length = 223
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 69/120 (57%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D G+F+ ++ GL PR+AE +A++E + W + L + E+D V+A++ +
Sbjct: 93 DSNGTFVACMAHAVLGLFEPRLAEAVALKEAIRWAIQMRFSLVVFESDSKIAVDAIRSLA 152
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
D+S++ +++ + + +S + + +VKR AN AH LA ++ +AS W++IP ++
Sbjct: 153 ADWSEFGIIIDECRSLLSLGLNFQVYFVKRQANMVAHVLAMSSYSYASLATWNVIPSCVE 212
>29607.m000244 hypothetical protein
Length = 329
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D GSF+ G S GL + ++AE I +RE + W+ SL I E D +V+AV G+
Sbjct: 199 DSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGA 258
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASF--------CVW 112
D ++ V+ D + + + S+ ++++ AN AHSLARA+ F C+
Sbjct: 259 ADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAHSLARASHLQDGFNMFSVPPDCIR 318
Query: 113 DMIPDFIQY 121
+++P F+ +
Sbjct: 319 NLVPPFVPF 327
>28657.m000384 conserved hypothetical protein
Length = 163
Score = 71.6 bits (174), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
DH G F+ A++ +G P +AE +A++E LSW R L + E DCL +V A+
Sbjct: 59 DHAGLFVCAMAVSFAGAYIPEIAEGLAIQEALSWARDRQLLNVVFELDCLHIVEALLRKG 118
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAA 103
D S L++ D K S S+ S A+VKR N+ AH LAR +
Sbjct: 119 TDRSSLGLIIKDCKLLSSSISNCSFAFVKRSRNEVAHKLARVS 161
>29738.m001015 hypothetical protein
Length = 304
Score = 65.9 bits (159), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D FIK + + SG+ + E I +RE L+W L L I + D +V+ +Q S
Sbjct: 174 DSASRFIKGSTRWFSGIWEVKEVECIVLREPLNWDVLLELQNVIFDVDAEAVVDVIQSRS 233
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFI 119
D S++ + + D F++ + + +VK+ AN AH LARA+ F S W+ P F+
Sbjct: 234 SDVSEFGVFIKDCLSFLADNLSFQVWFVKQQANVVAHKLARASHLFGSGVDWEEPPSFV 292
>29888.m000323 conserved hypothetical protein
Length = 119
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 16 GLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDYSDWSLVLGDIKH 75
G +PR AE I++RE LSWL+ IIE+D LQ++ A++ S S + L++ D KH
Sbjct: 11 GNYTPREAEAISIREALSWLKQQIFEECIIESDALQVIEALKAPS-SQSCFHLIIDDCKH 69
Query: 76 FISQSSDISIAWVKRHANQPAHSLARAA 103
+ + +V+R AN A +AR A
Sbjct: 70 LVQHFRQVHFQFVRRSANTAAQIVARGA 97
>29642.m000286 conserved hypothetical protein
Length = 346
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%)
Query: 6 FIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDYSD 65
F+ S GL R +ET+ +RE LSW+R I E DC Q+V+AV +
Sbjct: 222 FMCCASNCYEGLVQVRESETMRLREALSWIRGKWYQRVIFELDCQQIVHAVTNFLASVDE 281
Query: 66 WSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFI 119
+ ++ + +++++ S+ +VKR AN+ A+ LARA A V P FI
Sbjct: 282 FGSLIRECAELLAENNSYSVIFVKRQANEIAYMLARAPHSHAGLRVCFEPPTFI 335
>29983.m003210 conserved hypothetical protein
Length = 276
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 21 RVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGSLDYSDWSLVLGDIKHFISQS 80
R+AE ++E LSW+ L IIE+D ++++ + D S++ ++ + S
Sbjct: 171 RLAEAPFLKETLSWICEQSLANVIIESDAKMVIDSFHQFAFDISEFGCLVNTFRSIASFC 230
Query: 81 SDISIAWVKRHANQPAHSLARAACYFASFCVWDMIPDFIQ 120
++ + +VKR AN ++A+AA AS VW PDFI+
Sbjct: 231 VNVRVVFVKRQAN----AIAKAAHSNASLMVWQEAPDFIR 266
>29790.m000818 conserved hypothetical protein
Length = 191
Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
+H + + A + G+ +AE +A+RE LSW++ ++ I+ D L + A+ +
Sbjct: 84 NHAANLVAARALIIHGVYEANLAEAMAVREALSWIKHMNWSRVSIDMDSLGVCVALTSDN 143
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAA 103
L + L++ KH ++ D + ++R N AH LARA+
Sbjct: 144 LSF---GLIIDGCKHVVANIHDAAFTCIRRSTNHCAHMLARAS 183
>29661.m000941 hypothetical protein
Length = 199
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 1 DHRGSFIKAVSGYSSGLCSP-RVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGG 59
DH+G +K V Y P V E +A++ LS S L +++E+D LQ+VNA+
Sbjct: 89 DHKGC-VKLVGSYPMKQGLPVEVVEAMAIKCGLSVASSHGLWPSVVESDSLQVVNAICNR 147
Query: 60 SLDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAA 103
+ +S+ + VL +I +S + ++ R NQ A++L+++A
Sbjct: 148 EVIFSELAAVLSEIFAMLSLNFSCDFKFIFRECNQMANALSKSA 191
>29813.m001504 nucleic acid binding protein, putative
Length = 483
Score = 45.4 bits (106), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%)
Query: 1 DHRGSFIKAVSGYSSGLCSPRVAETIAMREVLSWLRSLHLGLTIIETDCLQLVNAVQGGS 60
D+ G +I V + +P VAE A++E LSW+ + + IETDCL+ + ++
Sbjct: 374 DNAGIWITGVLIIRPYIANPDVAEAWALKEALSWIHAKGMEEVQIETDCLRNIELLEEEL 433
Query: 61 LDYSDWSLVLGDIKHFISQSSDISIAWVKRHANQPAHSLARAAC 104
S +L D + + + ++ +V AN AH +++A C
Sbjct: 434 HPNSYLLCLLKDCQDLLRVLNRCNLVFVYGSANTVAHMISKATC 477