Jatropha Genome Database

JcPR13H21R2.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR13H21R2.10 + phase: 2 /pseudo/partial
         (108 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001223 ribose-phosphate pyrophosphokinase, putative            104   1e-23
30054.m000794 ribose-phosphate pyrophosphokinase, putative             98   9e-22
30054.m000790 ribose-phosphate pyrophosphokinase, putative             82   4e-17

>29709.m001223 ribose-phosphate pyrophosphokinase, putative
          Length = 374

 Score =  104 bits (259), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/49 (95%), Positives = 48/49 (97%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLITEAG NRVLACDLHSGQSMGYFDIPVDHVYGQ
Sbjct: 160 KTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQ 208


>30054.m000794 ribose-phosphate pyrophosphokinase, putative
          Length = 351

 Score = 97.8 bits (242), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 44/49 (89%), Positives = 47/49 (95%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDHVYGQ 97
           +TQGRESIAAKLVANLITEAG NRVLACD+HSGQSMGYFDIPVDHV+ Q
Sbjct: 137 KTQGRESIAAKLVANLITEAGANRVLACDIHSGQSMGYFDIPVDHVHCQ 185


>30054.m000790 ribose-phosphate pyrophosphokinase, putative
          Length = 395

 Score = 82.4 bits (202), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/45 (82%), Positives = 40/45 (88%)

Query: 49  QTQGRESIAAKLVANLITEAGVNRVLACDLHSGQSMGYFDIPVDH 93
           +T  RESIAAKLVANLITEAG NRVL CD+HSGQS+GYFDIPVD 
Sbjct: 181 KTSCRESIAAKLVANLITEAGANRVLVCDIHSGQSLGYFDIPVDQ 225