Jatropha Genome Database

JcPR04G356P.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR04G356P.10 + phase: 0 /pseudo/partial
         (104 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30025.m000575 zinc/iron transporter, putative                         102   4e-23
27942.m000156 zinc/iron transporter, putative                          94   1e-20
30138.m003868 zinc/iron transporter, putative                          81   1e-16
30147.m014229 zinc/iron transporter, putative                          77   2e-15
30100.m000778 zinc/iron transporter, putative                          74   1e-14
29794.m003320 zinc/iron transporter, putative                          69   5e-13
27800.m000037 zinc/iron transporter, putative                          66   3e-12
30189.m001669 zinc/iron transporter, putative                          59   5e-10

>30025.m000575 zinc/iron transporter, putative
          Length = 355

 Score =  102 bits (254), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 61/72 (84%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           + QA FK++AV TMV+FF+LTTP+GIAIGIGIS VYNE+SPTALIVEG+ NSAS+G    
Sbjct: 252 ISQANFKTRAVTTMVLFFALTTPAGIAIGIGISNVYNENSPTALIVEGVFNSASAGILIY 311

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 312 MALVDLLAADFM 323


>27942.m000156 zinc/iron transporter, putative
          Length = 359

 Score = 94.0 bits (232), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 57/72 (79%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           + QAKFKS+AVA MV+FFSLTTP GIA+GIGIS  YN ++ TALIVEG+ NSAS+G    
Sbjct: 256 ISQAKFKSRAVAAMVLFFSLTTPIGIAVGIGISHSYNGNAQTALIVEGVFNSASAGILIY 315

Query: 72  WLLVDLLASDFL 83
             LVDLLA DF+
Sbjct: 316 MALVDLLAEDFM 327


>30138.m003868 zinc/iron transporter, putative
          Length = 351

 Score = 80.9 bits (198), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 56/72 (77%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA++  K  A MV FFS TTP GIA+GIG+S VY+++SPTALIV GLLN++S+G    
Sbjct: 248 ILQAEYGMKIKAMMVFFFSATTPLGIALGIGLSNVYSDNSPTALIVVGLLNASSAGLLNY 307

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 308 MALVDLLAADFM 319


>30147.m014229 zinc/iron transporter, putative
          Length = 350

 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 52/72 (72%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA++K      M  FFS+TTP GIA+GI +SK Y E+SPTALI  GLLN++S+G    
Sbjct: 247 ILQAEYKLFKKVMMAFFFSVTTPFGIALGIALSKTYKENSPTALITVGLLNASSAGLLIY 306

Query: 72  WLLVDLLASDFL 83
             LVDLLA+DF+
Sbjct: 307 MALVDLLAADFM 318


>30100.m000778 zinc/iron transporter, putative
          Length = 101

 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 55/69 (79%)

Query: 15 AKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FIWLL 74
          AKFKS++ A M +FFSLTTP GIAIGI IS VY E+SPTALIVEG+ NSAS+G      L
Sbjct: 1  AKFKSRSTAIMAVFFSLTTPIGIAIGIAISSVYKENSPTALIVEGIFNSASAGILIYMAL 60

Query: 75 VDLLASDFL 83
          VD+LA+DF+
Sbjct: 61 VDILAADFM 69


>29794.m003320 zinc/iron transporter, putative
          Length = 419

 Score = 68.9 bits (167), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 47/70 (67%)

Query: 14  QAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FIWL 73
           QA+FK+ +   M  FF++TTP+GI IG  I+  YN  S  ALI EG+L+S S+G      
Sbjct: 318 QAQFKTLSATLMACFFAITTPTGIGIGTAIASFYNPHSQGALIAEGILDSLSAGILVYMA 377

Query: 74  LVDLLASDFL 83
           LVDL+A+DFL
Sbjct: 378 LVDLVAADFL 387


>27800.m000037 zinc/iron transporter, putative
          Length = 153

 Score = 66.2 bits (160), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 49/72 (68%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKVYNESSPTALIVEGLLNSASSGS*FI 71
           ++QA +K      M +FF +TTP GI +G+ ++KVY E +P A I+ GLLNS+SSG    
Sbjct: 50  IVQANYKLLKKVMMTLFFIVTTPFGIVLGMLLTKVYKEDTPAASIIVGLLNSSSSGILIY 109

Query: 72  WLLVDLLASDFL 83
             LVDLL++DF+
Sbjct: 110 MALVDLLSADFM 121


>30189.m001669 zinc/iron transporter, putative
          Length = 360

 Score = 58.9 bits (141), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 12  VMQAKFKSKAVATMVIFFSLTTPSGIAIGIGISKV--YNESSPTALIVEGLLNSASSGS* 69
           + QA F    VA M   FS+TTP GI +G+ I  +  Y++S+P ALI+EGLL S SSG  
Sbjct: 254 IAQAGFSMGTVAYMCFMFSVTTPMGILLGMIIFSLTGYDDSNPNALIMEGLLGSLSSGIL 313

Query: 70  FIWLLVDLLASDFLE 84
               LVDL+A DF  
Sbjct: 314 IYMGLVDLIAVDFFH 328