Jatropha Genome Database

JcPR03AM69T.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR03AM69T.10 + phase: 2 /pseudo/partial
         (61 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29908.m006253 carbonic anhydrase, putative                             66   3e-12

>29908.m006253 carbonic anhydrase, putative
          Length = 292

 Score = 66.2 bits (160), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/48 (66%), Positives = 36/48 (75%), Gaps = 7/48 (14%)

Query: 1   FIEKWVATADIAKLRTEADASGLSFDQQCKYCEK-------VCLHTYP 41
           F+EKWVATA IAKLRT+ DA GLSFDQQCK+CEK       + L TYP
Sbjct: 193 FVEKWVATAKIAKLRTKTDAGGLSFDQQCKHCEKESINWSLLNLLTYP 240