Jatropha Genome Database

JcPR02JBVLC.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR02JBVLC.10 - phase: 2 /pseudo/partial
         (55 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m013941 Pantothenate kinase, putative                            57   2e-09

>30147.m013941 Pantothenate kinase, putative
          Length = 907

 Score = 56.6 bits (135), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 30/44 (68%)

Query: 1   LMEEPAAYGKLGLANXXXXXXXXXXXFQFVDAYRSIKQRXSQFS 44
           LMEEPAAYGKLGLAN           F FVDAYRSIKQR ++ S
Sbjct: 600 LMEEPAAYGKLGLANLLELREECLREFHFVDAYRSIKQRENEAS 643