Jatropha Genome Database

JcPR02GC7KU.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR02GC7KU.10 + phase: 1 /pseudo/partial
         (55 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29854.m001136 Axial regulator YABBY2, putative                         65   5e-12
30174.m008839 conserved hypothetical protein                           65   6e-12
28200.m000191 Axial regulator YABBY1, putative                         65   9e-12
29927.m000626 Axial regulator YABBY5, putative                         64   2e-11
29631.m001046 Axial regulator YABBY4, putative                         59   4e-10
30174.m009083 Protein CRABS CLAW, putative                             56   3e-09

>29854.m001136 Axial regulator YABBY2, putative
          Length = 190

 Score = 65.5 bits (158), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 38/48 (79%), Gaps = 1/48 (2%)

Query: 2   EKRQRVPSAYNRFIKEENFKRIKASNPDISHREAF*YSSKKCKFHFHI 49
           EKRQRVPSAYNRFIKEE  +RIKASNPDISHREAF  ++K      HI
Sbjct: 107 EKRQRVPSAYNRFIKEE-IQRIKASNPDISHREAFSTAAKNWAHFPHI 153


>30174.m008839 conserved hypothetical protein
          Length = 120

 Score = 65.5 bits (158), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/49 (69%), Positives = 38/49 (77%), Gaps = 1/49 (2%)

Query: 1  PEKRQRVPSAYNRFIKEENFKRIKASNPDISHREAF*YSSKKCKFHFHI 49
          PEKRQRVPSAYNRFIK+E  +RIKA NPDISHREAF  ++K      HI
Sbjct: 33 PEKRQRVPSAYNRFIKDE-IQRIKAGNPDISHREAFSAAAKNWAHFPHI 80


>28200.m000191 Axial regulator YABBY1, putative
          Length = 214

 Score = 64.7 bits (156), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/49 (69%), Positives = 38/49 (77%), Gaps = 1/49 (2%)

Query: 1   PEKRQRVPSAYNRFIKEENFKRIKASNPDISHREAF*YSSKKCKFHFHI 49
           PEKRQRVPSAYNRFIK+E  +RIKA NPDISHREAF  ++K      HI
Sbjct: 124 PEKRQRVPSAYNRFIKDE-IQRIKAGNPDISHREAFSAAAKNWAHFPHI 171


>29927.m000626 Axial regulator YABBY5, putative
          Length = 185

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 40/49 (81%), Gaps = 1/49 (2%)

Query: 1   PEKRQRVPSAYNRFIKEENFKRIKASNPDISHREAF*YSSKKCKFHFHI 49
           PEKRQRVPSAYN+FIKEE  +RIKA+NP+ISHREAF  ++K    + HI
Sbjct: 108 PEKRQRVPSAYNQFIKEE-IQRIKANNPEISHREAFSTAAKNWAHYPHI 155


>29631.m001046 Axial regulator YABBY4, putative
          Length = 244

 Score = 58.9 bits (141), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 35/41 (85%), Gaps = 1/41 (2%)

Query: 1   PEKRQRVPSAYNRFIKEENFKRIKASNPDISHREAF*YSSK 41
           PEKRQR PSAYNRFIKEE  +R+KA NPD++H+EAF  ++K
Sbjct: 121 PEKRQRAPSAYNRFIKEE-IRRLKAENPDMAHKEAFSTAAK 160


>30174.m009083 Protein CRABS CLAW, putative
          Length = 193

 Score = 56.2 bits (134), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/41 (65%), Positives = 35/41 (85%), Gaps = 1/41 (2%)

Query: 1   PEKRQRVPSAYNRFIKEENFKRIKASNPDISHREAF*YSSK 41
           PEK+ R+PSAYNRF+KEE  +RIKA+NP+I HREAF  ++K
Sbjct: 108 PEKKHRLPSAYNRFMKEE-IQRIKAANPEIPHREAFSTAAK 147