Jatropha Genome Database
- JcPR01DAKSA.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcPR01DAKSA.10 + phase: 0 /partial
(67 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008781 lipoxygenase, putative 118 6e-28
29726.m003891 lipoxygenase, putative 107 1e-24
29680.m001710 lipoxygenase, putative 99 4e-22
30178.m000859 lipoxygenase, putative 75 8e-15
29808.m000898 lipoxygenase, putative 55 6e-09
29468.m000030 lipoxygenase, putative 55 1e-08
30152.m002449 lipoxygenase, putative 53 3e-08
29851.m002422 lipoxygenase, putative 51 1e-07
29851.m002424 lipoxygenase, putative 51 1e-07
30169.m006389 lipoxygenase, putative 50 3e-07
30169.m006387 lipoxygenase, putative 49 4e-07
>30128.m008781 lipoxygenase, putative
Length = 871
Score = 118 bits (295), Expect = 6e-28, Method: Composition-based stats.
Identities = 55/65 (84%), Positives = 60/65 (92%), Gaps = 1/65 (1%)
Query: 1 LKADETLKPLAIELSLPHPEGDQFGAVSKVCTPAEDG-VEGSIWLLAKAYVGVVDSGVHQ 59
LK D TLKP+AIELSLPHPEGD+FGA++KVCTPAEDG VEGSIW LAKAYV V+DSGVHQ
Sbjct: 469 LKEDGTLKPVAIELSLPHPEGDEFGAINKVCTPAEDGSVEGSIWQLAKAYVAVIDSGVHQ 528
Query: 60 LISHW 64
LISHW
Sbjct: 529 LISHW 533
>29726.m003891 lipoxygenase, putative
Length = 868
Score = 107 bits (266), Expect = 1e-24, Method: Composition-based stats.
Identities = 50/64 (78%), Positives = 55/64 (85%)
Query: 1 LKADETLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQL 60
L+ D TLKPLAIELSLPHP+G++ GAVSKV TPAEDGVEGS+W LAKAY V DSG HQL
Sbjct: 462 LQDDGTLKPLAIELSLPHPQGERHGAVSKVFTPAEDGVEGSVWQLAKAYAAVNDSGYHQL 521
Query: 61 ISHW 64
ISHW
Sbjct: 522 ISHW 525
>29680.m001710 lipoxygenase, putative
Length = 865
Score = 99.0 bits (245), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/65 (73%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 1 LKADETLKPLAIELSLPHPEGDQFGAVSKVCTPAE-DGVEGSIWLLAKAYVGVVDSGVHQ 59
L+ D TLKPLAIELSLPHP+GD GA S V TPAE +G+EGS+W LAKAYV V DSG HQ
Sbjct: 462 LRDDGTLKPLAIELSLPHPKGDHLGAESNVYTPAEQEGIEGSLWKLAKAYVAVNDSGYHQ 521
Query: 60 LISHW 64
LISHW
Sbjct: 522 LISHW 526
>30178.m000859 lipoxygenase, putative
Length = 852
Score = 74.7 bits (182), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 1 LKADETLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQL 60
L+ D TLKP+AIELSLP P D+ +S+V PA +G E ++W LAKA+V DS HQL
Sbjct: 449 LRNDATLKPVAIELSLPGPLKDK--EISRVFRPASEGTEAALWQLAKAHVAANDSAYHQL 506
Query: 61 ISHW 64
ISHW
Sbjct: 507 ISHW 510
>29808.m000898 lipoxygenase, putative
Length = 831
Score = 55.1 bits (131), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 1 LKADETLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQL 60
L D TLKP+AIEL+ P P GD+ V TP+ D +W +AKA+V DSG HQL
Sbjct: 428 LTNDGTLKPVAIELTRP-PIGDK-PVWRHVFTPSFDATSCWLWRMAKAHVCAHDSGYHQL 485
Query: 61 ISHW 64
I HW
Sbjct: 486 IVHW 489
>29468.m000030 lipoxygenase, putative
Length = 445
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 6 TLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQLISHW 64
TLKP+AIELSLP P + TP D IW LAKA+V D+GVHQL++HW
Sbjct: 50 TLKPIAIELSLP-PTAPS-ARSKRAVTPPVDATTTWIWQLAKAHVCSNDAGVHQLVNHW 106
>30152.m002449 lipoxygenase, putative
Length = 902
Score = 52.8 bits (125), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 1 LKADETLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQL 60
L D TL+P+AIEL+ P GD+ +V TP+ D +W LAKA+ DSG+HQL
Sbjct: 500 LVNDSTLRPVAIELTRPKI-GDK-PQWKQVFTPSFDATSCWLWRLAKAHALAHDSGIHQL 557
Query: 61 ISHW 64
+SHW
Sbjct: 558 VSHW 561
>29851.m002422 lipoxygenase, putative
Length = 837
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 6 TLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQLISHWY 65
TLKP+AIE++ P D V +V T D +W LAKA+V DSG HQLI HW
Sbjct: 440 TLKPIAIEVATV-PSTDSSFPVKQVLTSPVDATTYWLWQLAKAHVCSNDSGAHQLIHHWL 498
Query: 66 EI 67
+
Sbjct: 499 RV 500
>29851.m002424 lipoxygenase, putative
Length = 786
Score = 50.8 bits (120), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 6 TLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQLISHW 64
TL P+AIEL+ P D + +V TP D +W LAKA+V D+G HQLI HW
Sbjct: 389 TLNPIAIELTTI-PSKDSNSPIRQVLTPPVDASTYWLWQLAKAHVCSNDAGAHQLIHHW 446
>30169.m006389 lipoxygenase, putative
Length = 900
Score = 49.7 bits (117), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 1 LKADETLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQL 60
L D TL+PLAIEL+ P +G + V T GV +W LAKA+V +SG HQL
Sbjct: 498 LTPDGTLRPLAIELTRPPMDGKPQWKDAYVPTWHSTGV--WLWRLAKAHVLAHESGYHQL 555
Query: 61 ISHW 64
ISHW
Sbjct: 556 ISHW 559
>30169.m006387 lipoxygenase, putative
Length = 789
Score = 48.9 bits (115), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 1 LKADETLKPLAIELSLPHPEGDQFGAVSKVCTPAEDGVEGSIWLLAKAYVGVVDSGVHQL 60
L + TLKP+AIEL+ P +G +V T D +W LAKA+V DSG HQL
Sbjct: 387 LTPNGTLKPVAIELTRPPMDGKP--QWKQVFTHTWDSTGCWLWRLAKAHVLAHDSGYHQL 444
Query: 61 ISHW 64
+SHW
Sbjct: 445 VSHW 448