Jatropha Genome Database

JcPR01C6D2I.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR01C6D2I.10 + phase: 0 /pseudo/partial
         (103 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30106.m000666 aminobutyrate aminotransferase, putative                 95   9e-21
52698.m000015 adenosylmethionine-8-amino-7-oxononanoate aminotra...    48   1e-06

>30106.m000666 aminobutyrate aminotransferase, putative
          Length = 528

 Score = 94.7 bits (234), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 42/44 (95%), Positives = 43/44 (97%)

Query: 31  VICAFGRLGTMFGCDKYNIKPDLVSVAKALSSAYLPIGGVMVSP 74
           VICAFGRLGTMFGCDKYNIKPDLVSVAKALSSAY+PIG VMVSP
Sbjct: 324 VICAFGRLGTMFGCDKYNIKPDLVSVAKALSSAYMPIGAVMVSP 367


>52698.m000015 adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase, putative
          Length = 235

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 31/50 (62%)

Query: 31  VICAFGRLGTMFGCDKYNIKPDLVSVAKALSSAYLPIGGVMVSPRSFRCY 80
           +   FGR GTMF C++  I+PD + ++K ++  YLP+  V+ +   +R +
Sbjct: 132 IAVGFGRTGTMFACEQAGIRPDFICLSKGITGGYLPLSVVLTTDTVYRAF 181