Jatropha Genome Database

JcPR01BVAYK.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcPR01BVAYK.10 + phase: 0 /partial
         (64 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29732.m000316 NOI, putative                                           112   3e-26
29629.m001408 NOI, putative                                            92   4e-20
29633.m000906 NOI, putative                                            64   2e-11
30217.m000267 conserved hypothetical protein                           53   4e-08
29904.m002900 hypothetical protein                                     49   5e-07
29842.m003520 conserved hypothetical protein                           47   2e-06
29830.m001419 conserved hypothetical protein                           45   7e-06

>29732.m000316 NOI, putative
          Length = 77

 Score =  112 bits (280), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 57/59 (96%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPARDNSSFKPGSNTLGKPQS 59
          +PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPA+DNS +KPG+ TLGKPQS
Sbjct: 6  RPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPAKDNSGYKPGTTTLGKPQS 64


>29629.m001408 NOI, putative
          Length = 97

 Score = 92.4 bits (228), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/58 (77%), Positives = 51/58 (87%), Gaps = 1/58 (1%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPARDNSSFKPGSNTLGKPQ 58
          +PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGGKPDSP + +S  K G ++ GKPQ
Sbjct: 8  RPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPDSPGKADSHIKSGVDS-GKPQ 64


>29633.m000906 NOI, putative
          Length = 75

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 3/55 (5%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPA---RDNSSFKPGSN 52
          +PLPKFGEWDVN+PASAEGFTVIF+KAR+EKK+     + A   R+N+  KP  N
Sbjct: 8  RPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNAAGGAGAASQRNNNLHKPDDN 62


>30217.m000267 conserved hypothetical protein
          Length = 227

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 27/32 (84%)

Query: 3   LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 34
           +PKFGEWD N+PASA+G+T IFNK R E++ G
Sbjct: 161 VPKFGEWDENNPASADGYTHIFNKVREERQIG 192


>29904.m002900 hypothetical protein
          Length = 162

 Score = 48.9 bits (115), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/32 (62%), Positives = 26/32 (81%)

Query: 3   LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 34
           +PKFG+WD  +PASA+G+T IFNK R EK+ G
Sbjct: 105 VPKFGDWDETNPASADGYTHIFNKVREEKQGG 136


>29842.m003520 conserved hypothetical protein
          Length = 338

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/32 (59%), Positives = 23/32 (71%)

Query: 3   LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 34
           +PKFG WD  DP S EGFTVIFN+ + EK+  
Sbjct: 176 VPKFGAWDEADPTSGEGFTVIFNRVKEEKQAA 207


>29830.m001419 conserved hypothetical protein
          Length = 59

 Score = 45.1 bits (105), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/33 (69%), Positives = 27/33 (81%), Gaps = 1/33 (3%)

Query: 1  QPLPKFGEWDVNDPASAEGFTVIFNKARNEKKT 33
          +PLPKF E D N PASAE +TVIF+KA +EKKT
Sbjct: 8  RPLPKFSELDDN-PASAERYTVIFSKAMDEKKT 39