Jatropha Genome Database

JcCD0145641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0145641.10 + phase: 1 /pseudo/partial/short
         (49 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30076.m004534 cytochrome P450, putative                                55   5e-09

>30076.m004534 cytochrome P450, putative
          Length = 503

 Score = 55.5 bits (132), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query: 3  GSLAEMKELKKVARKTVLDTNSNDIIHRVVPHYHKWFSQY 42
          GSL E+K LK  A +TVLD +SNDI+ RV+P YHKW   Y
Sbjct: 54 GSLNELKRLKMAANQTVLDHHSNDIVQRVLPQYHKWSPLY 93