Jatropha Genome Database

JcCD0116228.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0116228.10 - phase: 1 /partial
         (61 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29915.m000488 kinase, putative                                         96   3e-21
29889.m003297 ATP binding protein, putative                            79   7e-16
30174.m009073 conserved hypothetical protein                           76   4e-15
29847.m000241 kinase, putative                                         75   7e-15
30174.m009072 conserved hypothetical protein                           65   5e-12
29598.m000447 ATP binding protein, putative                            60   2e-10
29847.m000238 kinase, putative                                         57   2e-09
27800.m000036 Serine/threonine-protein kinase PBS1, putative           55   1e-08

>29915.m000488 kinase, putative
          Length = 891

 Score = 96.3 bits (238), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/62 (69%), Positives = 52/62 (83%), Gaps = 2/62 (3%)

Query: 1   GTPVHKDYVVLIPGGSPQSDMWLALHPNPE--LKSQYYDALLNGVEIFKIASADGNLAGP 58
           G PVH+DY VL+   +PQ D+WLA+HPN +  LKSQYYDALLNGVEIFK+++AD NLAGP
Sbjct: 356 GVPVHRDYAVLVSSKNPQEDLWLAIHPNTDAVLKSQYYDALLNGVEIFKLSTADNNLAGP 415

Query: 59  NP 60
           NP
Sbjct: 416 NP 417


>29889.m003297 ATP binding protein, putative
          Length = 854

 Score = 78.6 bits (192), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 46/60 (76%)

Query: 1   GTPVHKDYVVLIPGGSPQSDMWLALHPNPELKSQYYDALLNGVEIFKIASADGNLAGPNP 60
           G P++KDY + +   S   ++W+ALHP+ ELK +YYDA+LNG+EIFK+   DGN+AGPNP
Sbjct: 349 GVPIYKDYAIHVGDQSGDDELWVALHPSVELKPEYYDAILNGLEIFKLNEPDGNMAGPNP 408


>30174.m009073 conserved hypothetical protein
          Length = 839

 Score = 75.9 bits (185), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 4/63 (6%)

Query: 1   GTPVHKDYVVLIPGGSPQS--DMWLALHPNPE--LKSQYYDALLNGVEIFKIASADGNLA 56
           G P++ DY++++P  S  +  D+WL LHPN    L SQYYDALLNGVEIFK+ +  GNLA
Sbjct: 375 GVPLYNDYIIMVPELSEMNIQDLWLELHPNSASVLHSQYYDALLNGVEIFKLNNYGGNLA 434

Query: 57  GPN 59
           GPN
Sbjct: 435 GPN 437


>29847.m000241 kinase, putative
          Length = 888

 Score = 75.1 bits (183), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 2   TPVHKDYVVLIPGGS-PQSDMWLALHPNPELKSQYYDALLNGVEIFKIASADGNLAGPNP 60
            P +KDYVV +P GS  + D+WLALHPN + K  ++DA+LNG+EIFK+  +DG+LAG NP
Sbjct: 360 VPAYKDYVVWVPEGSHSKQDLWLALHPNTKSKPAFHDAILNGLEIFKLNKSDGSLAGSNP 419


>30174.m009072 conserved hypothetical protein
          Length = 763

 Score = 65.5 bits (158), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/54 (50%), Positives = 41/54 (75%), Gaps = 1/54 (1%)

Query: 4   VHKDYVVLIPGGS-PQSDMWLALHPNPELKSQYYDALLNGVEIFKIASADGNLA 56
           +++DY+V++P G+  + D+WLALHPN E K  + +A+LNGVEI K + A+ NLA
Sbjct: 341 IYRDYIVMVPQGTGEKQDLWLALHPNTESKPMFKNAILNGVEIMKFSDANNNLA 394


>29598.m000447 ATP binding protein, putative
          Length = 842

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 39/60 (65%)

Query: 1   GTPVHKDYVVLIPGGSPQSDMWLALHPNPELKSQYYDALLNGVEIFKIASADGNLAGPNP 60
           G P +KDY++++        + + LHP+   K + YDA LNG+E+FKI+  D NLAGPNP
Sbjct: 353 GQPTYKDYMIIVNDKQGDDYIQVDLHPSTLTKPEIYDAALNGLEVFKISDKDNNLAGPNP 412


>29847.m000238 kinase, putative
          Length = 904

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 3/62 (4%)

Query: 1   GTPVHKDYVV-LIPGGSPQ-SDMWLALHPNPELKSQYYDALLNGVEIFKIASADGNLAGP 58
           G PV+KDY V + P GS +   + +ALHP PE +++   A+LNG+EIFK++ +D NLA P
Sbjct: 381 GIPVYKDYAVKMEPKGSEKFQKLAIALHPKPEDRTRAASAILNGLEIFKLSVSD-NLASP 439

Query: 59  NP 60
           NP
Sbjct: 440 NP 441


>27800.m000036 Serine/threonine-protein kinase PBS1, putative
          Length = 685

 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)

Query: 2   TPVHKDYVVLIPG--GSPQSDMWLALHPNPELKSQYYDALLNGVEIFKIASADGNLAGPN 59
           TP++ DY++      G+   D  L +   P   S Y D+ LNG+EIFK+  +DGNL GPN
Sbjct: 162 TPIYNDYILKAGNKRGTAADDYKLFITLRPNASSVYLDSFLNGMEIFKLNDSDGNLGGPN 221

Query: 60  P 60
           P
Sbjct: 222 P 222