Jatropha Genome Database

JcCD0071482.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0071482.10 - phase: 1 /pseudo/partial
         (75 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002051 bsu-protein phosphatase, putative                       101   7e-23
30221.m002246 bsu-protein phosphatase, putative                        76   3e-15

>29647.m002051 bsu-protein phosphatase, putative
          Length = 885

 Score =  101 bits (252), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/45 (100%), Positives = 45/45 (100%)

Query: 31  VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 75
           VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP
Sbjct: 108 VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152


>30221.m002246 bsu-protein phosphatase, putative
          Length = 874

 Score = 76.3 bits (186), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/45 (75%), Positives = 38/45 (84%)

Query: 31 VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 75
          VGTMVV QGGIGPAG S +DL+VLDLT  + +WHRVVVQG GPGP
Sbjct: 49 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 93