Jatropha Genome Database

JcCD0058471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0058471.10 - phase: 1 /partial
         (57 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002051 bsu-protein phosphatase, putative                       118   5e-28
30221.m002246 bsu-protein phosphatase, putative                        84   1e-17

>29647.m002051 bsu-protein phosphatase, putative
          Length = 885

 Score =  118 bits (296), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 55/56 (98%), Positives = 56/56 (100%)

Query: 1   KRVLSDAWALDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGM 56
           KRVLSDAWALDTAQKPYAWQRLNPEGDRP+ARMYATASARSDGMFLLCGGRDSSGM
Sbjct: 175 KRVLSDAWALDTAQKPYAWQRLNPEGDRPTARMYATASARSDGMFLLCGGRDSSGM 230


>30221.m002246 bsu-protein phosphatase, putative
          Length = 874

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 38/56 (67%), Positives = 45/56 (80%)

Query: 1   KRVLSDAWALDTAQKPYAWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGM 56
           KR LSD WALDTA KPY W++L PEG+ P   MYATASARSDG+ LLCGGRD++ +
Sbjct: 116 KRPLSDVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSV 171