Jatropha Genome Database

JcCD0055602.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCD0055602.10 - phase: 2 /pseudo/partial
         (114 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30075.m001157 ATP binding protein, putative                            86   5e-18

>30075.m001157 ATP binding protein, putative
          Length = 1548

 Score = 85.5 bits (210), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/65 (63%), Positives = 46/65 (70%)

Query: 50   KLESAHDNIPTYYVVFSNYNDYDSVSRIFCATRTCLVHCSLDTETESMVKKVLSVLKMEE 109
            KL   H NIP Y VVFSN ND  SVSRIFCA RTC+V CSLDTE E +V+K+   LK E 
Sbjct: 1025 KLGLPHGNIPAYCVVFSNINDPRSVSRIFCAIRTCMVRCSLDTERECLVQKIFHALKTEA 1084

Query: 110  KLLPK 114
            K+ PK
Sbjct: 1085 KISPK 1089