Jatropha Genome Database

JcCC0408522.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCC0408522.10 - phase: 0 /pseudo/partial
         (260 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30040.m000267 conserved hypothetical protein                          447   e-126
30131.m006948 conserved hypothetical protein                          216   1e-56

>30040.m000267 conserved hypothetical protein
          Length = 1020

 Score =  447 bits (1151), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/232 (93%), Positives = 225/232 (96%), Gaps = 1/232 (0%)

Query: 1   EAQILHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 60
           EAQILHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI
Sbjct: 516 EAQILHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVI 575

Query: 61  ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSAEINRLGLLAE 120
           ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSAEINRLGLLAE
Sbjct: 576 ESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSAEINRLGLLAE 635

Query: 121 PMPSLDAIAMRINFSSGGLPPMPSLQKHELCPGQNGDIRSPKRSCPDYRSVLVERNSFTS 180
           PMPSLDAIA+ INFSSGGLPP+ S+ KHE+ PGQNGDIRSPKR C DYRSVLVERNSFTS
Sbjct: 636 PMPSLDAIAVHINFSSGGLPPLSSVSKHEISPGQNGDIRSPKRPCTDYRSVLVERNSFTS 695

Query: 181 PVKDRLLAFSNLKSKL-PPPLQSAFASPTRPNPGGGGETCAETGINVFFTKV 231
           PVKDRLLAF+NLKSKL PPPLQSAFASPTRPNPGGGGETCAETGIN+FF+K+
Sbjct: 696 PVKDRLLAFTNLKSKLPPPPLQSAFASPTRPNPGGGGETCAETGINIFFSKI 747


>30131.m006948 conserved hypothetical protein
          Length = 612

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/225 (53%), Positives = 151/225 (67%), Gaps = 11/225 (4%)

Query: 7   ATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRH 66
           + +L+ LL+NERFHRC+LACSAELV A      ML   + ERTG+TAFDLSKVIESFI H
Sbjct: 158 SDHLSGLLSNERFHRCLLACSAELVSAAQTGTGMLLSVIFERTGVTAFDLSKVIESFIIH 217

Query: 67  EESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSAEINRLGLLAEPMPSLD 126
           E +LPRELRRHLNS+EE+LLE  VWEKGSS+YNSL VARP+LS EIN L LLA+PMPSL+
Sbjct: 218 EPTLPRELRRHLNSMEEQLLERRVWEKGSSLYNSLVVARPALSDEINSLQLLAQPMPSLE 277

Query: 127 AIAMRINFSSGGLPPMPSLQKHELCPGQNGDIRSPKRSCPDYRSVLVERNSFTSPVKDRL 186
            ++       GGL     LQKH+L   Q+    SPKR C ++  V+++ NS   P  D  
Sbjct: 278 TVSPTY---FGGLLCSTILQKHKLSQAQDRGTISPKRPCTEHADVVLKHNSTYCPKTDCP 334

Query: 187 LAFSNLKSKLPPPLQSAFASPTRPNPGGGGETCAETGINVFFTKV 231
            AFS  ++K  P      ASP+  +      TC++T INV F+K+
Sbjct: 335 TAFSTPQTKQTP------ASPS--SSLQNIPTCSDTAINVLFSKM 371