Jatropha Genome Database

JcCC0332622.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCC0332622.10 - phase: 0 
         (79 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28153.m000283 glutathione peroxidase, putative                         67   1e-12
29657.m000470 glutathione peroxidase, putative                         57   2e-09
30190.m011205 glutathione peroxidase, putative                         54   1e-08
30190.m011204 glutathione peroxidase, putative                         54   1e-08
29848.m004526 glutathione peroxidase, putative                         50   3e-07

>28153.m000283 glutathione peroxidase, putative
          Length = 1558

 Score = 67.4 bits (163), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/34 (79%), Positives = 32/34 (94%)

Query: 1    MGSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
            MGS IKWNFTKFL++++GQVINRYGPTT+PLS E
Sbjct: 1516 MGSGIKWNFTKFLVSKDGQVINRYGPTTSPLSIE 1549


>29657.m000470 glutathione peroxidase, putative
          Length = 167

 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 22/34 (64%), Positives = 28/34 (82%)

Query: 1   MGSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
            G +IKWNFTKFL+N+EG+V+ RY PTT+PL  E
Sbjct: 124 FGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIE 157


>30190.m011205 glutathione peroxidase, putative
          Length = 169

 Score = 54.3 bits (129), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 28/34 (82%)

Query: 1   MGSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
            G  I+WNF KFL+N++GQV++RY PTT+PLS E
Sbjct: 127 FGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLE 160


>30190.m011204 glutathione peroxidase, putative
          Length = 168

 Score = 53.9 bits (128), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 28/33 (84%)

Query: 2   GSSIKWNFTKFLINREGQVINRYGPTTNPLSFE 34
           G  IKWNF+KFL++++G V++RY PTT+PLS E
Sbjct: 126 GDGIKWNFSKFLVDKDGNVVDRYAPTTSPLSIE 158


>29848.m004526 glutathione peroxidase, putative
          Length = 265

 Score = 49.7 bits (117), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 5/62 (8%)

Query: 1   MGSSIKWNFTKFLINREGQVINRYGPTTNPLSFEVMYHPCAPGNLWQPANVWKVLISLEY 60
           +G  IKWNF KFL+++ G+V+ RY PTT+P   EV +        ++  +++  L+ L Y
Sbjct: 196 LGDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEVYFF-----FYFKNLDIFGTLVPLNY 250

Query: 61  YH 62
           + 
Sbjct: 251 HE 252