Jatropha Genome Database

JcCB0983611.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0983611.10 + phase: 0 /partial/short
         (40 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30115.m001234 nicotinate phosphoribosyltransferase, putative           74   2e-14

>30115.m001234 nicotinate phosphoribosyltransferase, putative
          Length = 561

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/40 (87%), Positives = 36/40 (90%)

Query: 1   MGIRLDSGDLAYLSGEARKFFRAIEKEFGVPGFGKMSITA 40
           +GIRLDSGDLAYLS E RKFF AIEKEFGVPGFGK SITA
Sbjct: 330 VGIRLDSGDLAYLSSEVRKFFCAIEKEFGVPGFGKTSITA 369