Jatropha Genome Database

JcCB0979461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0979461.10 - phase: 2 /partial
         (123 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29801.m003175 conserved hypothetical protein                          162   3e-41
30150.m000484 conserved hypothetical protein                           84   1e-17
35547.m000034 Protein DJ-1, putative                                   61   2e-10
44408.m000029 HTH-type transcriptional regulator glxA, putative        50   3e-07
32094.m000031 protease C56, putative                                   46   4e-06

>29801.m003175 conserved hypothetical protein
          Length = 477

 Score =  162 bits (411), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 83/113 (73%), Positives = 91/113 (80%)

Query: 11  LQGEIAGAQRXXXXXXXXXXXXEQDAAGRIYGAVCSSPAVLHNQGLLKDKKATAHPSVEN 70
           L GE AGA+R            EQDAAGRIYGAVCSS +VL +QGLLKDKKATAHPS  +
Sbjct: 360 LPGETAGAKRLQKSRILKKLLKEQDAAGRIYGAVCSSISVLQSQGLLKDKKATAHPSFSS 419

Query: 71  QLSNNVINDAKVVIDGKVITSKGHATVTDFAMAIVSKLFGHARARSVAEGLVF 123
           QL+N V++ AKVVIDGK+ITSKG ATVTDFAMAIVSKLFG ARARSVAEGLVF
Sbjct: 420 QLTNEVVDGAKVVIDGKLITSKGLATVTDFAMAIVSKLFGEARARSVAEGLVF 472



 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 6   FFLSELQGEIAGAQRXXXXXXXXXXXXEQDAAGRIYGAVCSSPAV-LHNQGLLKDKKATA 64
           F L  L G + G+ R            +Q    R+YGA+CS+PAV L   GLLK K+ T 
Sbjct: 152 FDLVALPGGMPGSARLRDCKILQQITSKQAEEKRLYGAICSAPAVTLLPWGLLKRKQTTC 211

Query: 65  HPSVENQLSNNVINDAKVVIDGKVITSKGHATVTDFAMAIVSKLFGHARARSVAEGLVF 123
           HP+  ++L       + + + G++ TS+G  T   FA+++  +LFG + A+ V E L+ 
Sbjct: 212 HPAFMDKLPTFWAVKSNIQVSGELTTSRGPGTCFQFALSLSEQLFGESIAKEVGEFLLM 270


>30150.m000484 conserved hypothetical protein
          Length = 364

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 1/113 (0%)

Query: 12  QGEIAGAQRXXXXXXXXXXXXEQDAAGRIYGAVCSSPA-VLHNQGLLKDKKATAHPSVEN 70
           QG + GAQ             +Q    + YGA+C+SPA VL   GLLK KKATA P++ +
Sbjct: 249 QGGLGGAQAFAKSEKLVNMLRKQKDTNKPYGAICASPALVLEPHGLLKGKKATAFPAMCD 308

Query: 71  QLSNNVINDAKVVIDGKVITSKGHATVTDFAMAIVSKLFGHARARSVAEGLVF 123
           +LS+    + +V++DG +ITS+G  T  +FA+ IV K FG  +A  +A+ ++F
Sbjct: 309 KLSDRSEAENRVIVDGNLITSRGPGTSMEFALGIVEKFFGRHKALELAKVMLF 361



 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 3/121 (2%)

Query: 6   FFLSELQGEIAGAQRXXXXXXXXXXXXEQDAAGRIYGAVCSSPAV-LHNQGLLKDKKATA 64
           F L  L G + GA              +Q A GR+Y AVC+SPAV   + G+LK  KAT 
Sbjct: 104 FDLIALPGGMPGATNLKTCGTLESMVKKQAADGRLYAAVCASPAVAFGSWGVLKGLKATC 163

Query: 65  HPSVENQL--SNNVINDAKVVIDGKVITSKGHATVTDFAMAIVSKLFGHARARSVAEGLV 122
           +PS   QL  S+    D++V  DG V+TS+G  T  +FA+A+V +L+G  +A  V+  L+
Sbjct: 164 YPSFMEQLQSSDATAVDSRVQQDGIVVTSRGPGTTMEFAVALVEQLYGKDKANEVSGPLI 223

Query: 123 F 123
            
Sbjct: 224 M 224


>35547.m000034 Protein DJ-1, putative
          Length = 135

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 3/82 (3%)

Query: 38  GRIYGAVCSSPAVLHNQGLLKDKKATAHPSVENQL--SNNVINDAKVVIDGKVITSKGHA 95
           G+   A+C++P  LH  GLL+ K+AT+ P V  ++  ++    DA VV+DG ++TS+G  
Sbjct: 46  GKYVAAICAAPMALHAAGLLEGKRATSFPGVIEEMPGTHRYQTDA-VVVDGNIVTSRGPG 104

Query: 96  TVTDFAMAIVSKLFGHARARSV 117
           T  DFA+ +V  L G ++  +V
Sbjct: 105 TAMDFALQLVELLAGKSKRDAV 126


>44408.m000029 HTH-type transcriptional regulator glxA, putative
          Length = 321

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 5/90 (5%)

Query: 39  RIYGAVCSSPAVLHNQGLLKDKKATAH----PSVENQLSNNVINDAKV-VIDGKVITSKG 93
           R   ++C+   VL   GLL+ K+AT H       + Q  N  + + ++ V+DG++ TS G
Sbjct: 101 RRIASICTGAFVLAAAGLLEGKRATTHWFHARDFQKQYPNVQLEEDRIFVVDGQIWTSAG 160

Query: 94  HATVTDFAMAIVSKLFGHARARSVAEGLVF 123
            +   D A+AIV   FG   +R VA  LV 
Sbjct: 161 MSAGVDLALAIVENDFGLDTSRMVARKLVL 190


>32094.m000031 protease C56, putative
          Length = 199

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)

Query: 43  AVCSSPAVLHNQGLLKDKKATAHPSVENQLSNNVIN--DAKVVIDGKVITSKGHATVTDF 100
           A+C  P  L + G+ + K+ T+ PS++  LSN      D +VV+DGK++TS+    +  F
Sbjct: 127 AICHGPWTLIDAGVAQGKRMTSWPSLKQDLSNAGAQWVDEQVVVDGKLVTSRKPDDIPAF 186

Query: 101 AMAIVSKLFG 110
             A++ +L G
Sbjct: 187 NKALLKELSG 196