Jatropha Genome Database

JcCB0971801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0971801.10 + phase: 0 /partial
         (100 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29841.m002859 GTP binding protein, putative                           192   3e-50
29927.m000612 conserved hypothetical protein                          132   3e-32
30073.m002200 GTP binding protein, putative                            59   5e-10
29718.m000129 conserved hypothetical protein                           54   2e-08
29718.m000131 conserved hypothetical protein                           53   3e-08
30190.m011284 conserved hypothetical protein                           53   3e-08
30073.m002197 GTP binding protein, putative                            51   1e-07
29718.m000130 conserved hypothetical protein                           49   6e-07
29308.m000184 GTP binding protein, putative                            49   7e-07
30190.m011188 GTP binding protein, putative                            48   8e-07

>29841.m002859 GTP binding protein, putative
          Length = 206

 Score =  192 bits (487), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 90/100 (90%), Positives = 95/100 (95%)

Query: 1   RPSLHNRWEGYLGERSDGQKPIFSVRRSSMIGRCSVAVEVYGNPGEEYQIEGSFANRCCT 60
           RPSLH+RWEGYLGERS+GQKP+FSVRRSS+IGRCSVAVEVYGNPGEEYQIEGSFANR CT
Sbjct: 77  RPSLHHRWEGYLGERSEGQKPVFSVRRSSIIGRCSVAVEVYGNPGEEYQIEGSFANRSCT 136

Query: 61  IFNTVKESVAEIRRKVDASTNVVLGKDVFSLCLKPGFDAA 100
            FN VKESVAEIRRKVD ST+VVLGKDVFSLCLKPGFD A
Sbjct: 137 FFNAVKESVAEIRRKVDTSTHVVLGKDVFSLCLKPGFDGA 176


>29927.m000612 conserved hypothetical protein
          Length = 218

 Score =  132 bits (332), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/109 (59%), Positives = 83/109 (76%), Gaps = 9/109 (8%)

Query: 1   RPSLHNRWEGYLGERSDG--QKPIFSVRRSSMIGRCSVAVEVYGNPGEEYQIEGSFANRC 58
           +PSLH RW+GYLGER++   Q PIFSV +S++IGR S+ VEV G+PGEEYQIEG+++ R 
Sbjct: 76  KPSLHQRWDGYLGERNEANHQDPIFSVSKSTIIGRSSLVVEVCGDPGEEYQIEGNYSRRR 135

Query: 59  CTIFNTV-------KESVAEIRRKVDASTNVVLGKDVFSLCLKPGFDAA 100
           C I+NT        K+ VAEI+RKVD +T V+LGKDVF L +KPG DAA
Sbjct: 136 CMIYNTTSLEDPSSKDPVAEIKRKVDPTTKVMLGKDVFWLRVKPGLDAA 184


>30073.m002200 GTP binding protein, putative
          Length = 224

 Score = 58.9 bits (141), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 13/107 (12%)

Query: 3   SLHNRWEGYLGERSDG-QKPIFSVRRSSMI---GRCSVAVEVYG------NPGEEYQIEG 52
           S+  +W  Y GE   G    +FS+R SS+I   GR    + + G      NP  +++IEG
Sbjct: 97  SMQYQWNAYRGEYGCGTNSKLFSMRSSSVIFHTGRDVSEIFMGGLTRQCQNP--DFRIEG 154

Query: 53  SFANRCCTIFNTVKESVAEIRRKVDASTNVVLGKDVFSLCLKPGFDA 99
           SF  R C I +   E VA++ RK   +T V+L  DVFSL +KPGFD 
Sbjct: 155 SFRARDCKIKSASDEVVAKMSRK-RVNTTVLLSDDVFSLVVKPGFDT 200


>29718.m000129 conserved hypothetical protein
          Length = 213

 Score = 53.5 bits (127), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 9/102 (8%)

Query: 5   HNRWEGYLGERSDGQKPIFSVRRSSMIG-RCSVAVEVYGNPGE--EYQIEGSFANRCCTI 61
           H RWE + GE ++ +  +FSV++SS+I  +  + V +  N  E  +++I+G++  R CTI
Sbjct: 95  HRRWEAFRGESTEAKDLLFSVKKSSIIQFKTQLNVFLASNTSEVPDFKIKGTWRERSCTI 154

Query: 62  FNTVKES---VAEIRRKVDASTNVVLGKDVFSLCLKPGFDAA 100
           F  + ES   VA++ R  + +T  +L  D F + + P  D A
Sbjct: 155 F--LGESNIIVAKMHRGHNLTT-AILETDNFEVTVYPNVDYA 193


>29718.m000131 conserved hypothetical protein
          Length = 220

 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 12/104 (11%)

Query: 5   HNRWEGYLGERSDGQKPIFSVRRSSMIG-RCSVAVEVYGNPGE---EYQIEGSFANRCCT 60
           H RW+ + GE ++ Q  +FSV++SS+I  +  + V +  N  E   ++++ GS+  R CT
Sbjct: 96  HRRWKVFRGESTNDQDLLFSVKKSSIIQFKTELDVCLAANTAEDVPDFKVRGSWLERSCT 155

Query: 61  IF----NTVKESVAEIRRKVDASTNVVLGKDVFSLCLKPGFDAA 100
           I+    NT+   +A++ RK    T VV   D F + + P  D A
Sbjct: 156 IYLGQTNTI---IAQMHRKHTLQT-VVFDADNFGVTVYPNVDYA 195


>30190.m011284 conserved hypothetical protein
          Length = 227

 Score = 52.8 bits (125), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 8/88 (9%)

Query: 19  QKPIFSVRR--SSMIGRCSVAVEVYGNPGEE------YQIEGSFANRCCTIFNTVKESVA 70
           +KPI+SV++  S + G  +V   VY     E      Y IEGS+  R C I +  +  VA
Sbjct: 124 KKPIWSVKKHISILRGNDNVLAHVYRGSCIEKRNNYSYVIEGSYRQRSCKIMDESRNVVA 183

Query: 71  EIRRKVDASTNVVLGKDVFSLCLKPGFD 98
           EI+RK      V  G +VF L ++PGFD
Sbjct: 184 EIKRKEAMVVGVSFGVEVFLLVVQPGFD 211


>30073.m002197 GTP binding protein, putative
          Length = 215

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 12/109 (11%)

Query: 1   RPSLHNRWEGYLGERSDGQKPIFSVRRSSMIGRCSVAVEVYGNPGEE---------YQIE 51
           R SL + W  Y GE +    P+FSVR+   I        V GN             Y+IE
Sbjct: 89  RLSLGDNWLVYDGETA--VNPLFSVRKHVKILNTKSLAHVSGNSSSGSTSNSKNIVYEIE 146

Query: 52  GSFANRCCTIFNTVKESVAEIRRKVDASTNVVLGKDVFSLCLKPGFDAA 100
           GS++ R C +++     VAEI++K +A   V  G DVF L + P  D +
Sbjct: 147 GSYSQRSCAVYDDKHRRVAEIKQK-EAVGGVAFGVDVFRLIIGPKMDTS 194


>29718.m000130 conserved hypothetical protein
          Length = 215

 Score = 48.5 bits (114), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 58/104 (55%), Gaps = 9/104 (8%)

Query: 5   HNRWEGYLGERSDGQKPIFSVRRSSMIG-RCSVAVEVYGNPGEE----YQIEGSFANRCC 59
           H+RW+ + GE +D +  IF+ +  S+   +  + V +  N  +E    ++++GSF  R C
Sbjct: 92  HSRWQVFRGESTDPKDVIFTAKTHSIFYLKTKLDVFLANNNTDEKVCDFKVKGSFFERSC 151

Query: 60  TIFNTVKES---VAEIRRKVDASTNVVLGKDVFSLCLKPGFDAA 100
            ++   ++S   VA++ +K  A + ++LGK  F++ + P  D A
Sbjct: 152 VVYAGDEDSTTIVAQMHKKHSAQS-ILLGKTNFTVTVYPNIDYA 194


>29308.m000184 GTP binding protein, putative
          Length = 203

 Score = 48.5 bits (114), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 9/101 (8%)

Query: 8   WEGY--LGERSDGQKPIFSVRRSSMIGR----CSVAVEV-YGNPGEEYQIEGSFANR-CC 59
           WEGY  +  + +  KP+F VRR   + R    CSV V +    P  +Y I   +  +  C
Sbjct: 88  WEGYRSIDAKINETKPVFQVRRPFRLLRGGLACSVIVGLDKDQPSAQYNIVSGWTGKSIC 147

Query: 60  TIFNTVKESVAEIRRKVDASTNVVLGKDVFSLCLKPGFDAA 100
            I +     +AE++RK  + + VVLG+DV ++ ++P  D +
Sbjct: 148 KIVDISGILIAEVKRK-QSGSGVVLGEDVLTMVVEPSIDHS 187


>30190.m011188 GTP binding protein, putative
          Length = 209

 Score = 48.1 bits (113), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 7/101 (6%)

Query: 4   LHNRWEGYLGE--RSDGQKPIFSVRRSSMIGR----CSVAVEVYGNPGEEYQIEGSFANR 57
           L  +W+GY  +  +S  QKP F VR+SS I +    C +AV         Y+++ S    
Sbjct: 92  LFRQWKGYKSDELKSRKQKPFFQVRQSSRILKRNLSCKIAVRSGTWQDGYYKLKASAGKS 151

Query: 58  CCTIFNTVKESVAEIRRKVDASTNVVLGKDVFSLCLKPGFD 98
              I ++    VA+  RK   ST +VLG DV +L ++P  D
Sbjct: 152 AFKITDSNGGLVAKATRK-QTSTGIVLGDDVLTLAVEPHVD 191