Jatropha Genome Database

JcCB0969631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0969631.10 + phase: 1 /partial
         (71 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29863.m001055 Cellulose synthase A catalytic subunit 6 [UDP-form...   112   4e-26
29848.m004649 Cellulose synthase A catalytic subunit 6 [UDP-form...   112   4e-26
29761.m000416 Cellulose synthase A catalytic subunit 6 [UDP-form...   108   4e-25
28093.m000117 Cellulose synthase A catalytic subunit 6 [UDP-form...   108   6e-25
29637.m000754 Cellulose synthase A catalytic subunit 6 [UDP-form...   108   6e-25
29606.m000101 Cellulose synthase A catalytic subunit 6 [UDP-form...   104   7e-24
29482.m000171 Cellulose synthase A catalytic subunit 3 [UDP-form...   103   2e-23
30026.m001452 wd40 protein, putative                                   88   7e-19
30068.m002658 cellulose synthase, putative                             58   1e-09
29904.m002970 Cellulose synthase A catalytic subunit 1 [UDP-form...    58   1e-09
29986.m001674 Cellulose synthase A catalytic subunit 3 [UDP-form...    56   3e-09
30073.m002256 Cellulose synthase A catalytic subunit 3 [UDP-form...    56   3e-09
30162.m001289 cellulose synthase, putative                             52   5e-08
29603.m000539 cellulose synthase, putative                             47   2e-06
29603.m000541 transferase, putative                                    46   3e-06

>29863.m001055 Cellulose synthase A catalytic subunit 6
           [UDP-forming], putative
          Length = 1095

 Score =  112 bits (279), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 63/71 (88%)

Query: 1   IEDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKT 60
           +++E + +MP+ K EKKFGQS VF+ASTL+E+GG  KGA+ ASLLKEAIHVISCGYEDK+
Sbjct: 721 VDNEKSELMPQIKFEKKFGQSAVFIASTLMEEGGIPKGATSASLLKEAIHVISCGYEDKS 780

Query: 61  EWGKEVGWIYG 71
           EWGKEVGWIYG
Sbjct: 781 EWGKEVGWIYG 791


>29848.m004649 Cellulose synthase A catalytic subunit 6
           [UDP-forming], putative
          Length = 1083

 Score =  112 bits (279), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/70 (68%), Positives = 58/70 (82%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           +DE + +M +  LEK+FGQSPVF+A+T +E GG     +PASLLKEAIHVISCGYEDKTE
Sbjct: 708 DDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPASLLKEAIHVISCGYEDKTE 767

Query: 62  WGKEVGWIYG 71
           WGKE+GWIYG
Sbjct: 768 WGKEIGWIYG 777


>29761.m000416 Cellulose synthase A catalytic subunit 6
           [UDP-forming], putative
          Length = 899

 Score =  108 bits (271), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/70 (68%), Positives = 59/70 (84%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           +DE + +M +  LEK+FGQS VFVASTL+E+GG  + A+P SLLKEAIHVISCGYEDKT+
Sbjct: 696 DDEKSMLMSQMTLEKRFGQSAVFVASTLMENGGVPESATPESLLKEAIHVISCGYEDKTD 755

Query: 62  WGKEVGWIYG 71
           WG E+GWIYG
Sbjct: 756 WGSEIGWIYG 765


>28093.m000117 Cellulose synthase A catalytic subunit 6
           [UDP-forming], putative
          Length = 828

 Score =  108 bits (270), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query: 4   ENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWG 63
           E ++   + KLEKKFGQSPVFVAS LLE+GG    ASPA+LL+EAI VISCGYEDKTEWG
Sbjct: 457 EKSSETAQLKLEKKFGQSPVFVASALLENGGVPHDASPAALLREAIQVISCGYEDKTEWG 516

Query: 64  KEVGWIYG 71
           KEVGWIYG
Sbjct: 517 KEVGWIYG 524


>29637.m000754 Cellulose synthase A catalytic subunit 6
           [UDP-forming], putative
          Length = 1044

 Score =  108 bits (269), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/66 (68%), Positives = 58/66 (87%)

Query: 6   AAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTEWGKE 65
           +++M +   EK+FGQSPVF+ STL+E+GG  +G +PA+L+KEAIHVISCGYE+KTEWGKE
Sbjct: 675 SSLMSQKNFEKRFGQSPVFITSTLMEEGGLPEGTNPATLIKEAIHVISCGYEEKTEWGKE 734

Query: 66  VGWIYG 71
           VGWIYG
Sbjct: 735 VGWIYG 740


>29606.m000101 Cellulose synthase A catalytic subunit 6
           [UDP-forming], putative
          Length = 1085

 Score =  104 bits (260), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 46/70 (65%), Positives = 58/70 (82%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           +DE + +M +  LEK+FGQS VFVASTL+E+GG  + A+  +LLKEAIHVISCGYEDKT+
Sbjct: 711 DDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATSETLLKEAIHVISCGYEDKTD 770

Query: 62  WGKEVGWIYG 71
           WG E+GWIYG
Sbjct: 771 WGSEIGWIYG 780


>29482.m000171 Cellulose synthase A catalytic subunit 3
           [UDP-forming], putative
          Length = 977

 Score =  103 bits (257), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/70 (64%), Positives = 56/70 (80%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
           ED+   +M +   EKKFG+S +FV STL+E+GG    +SPA+LLKEAIHVISCGYEDKT+
Sbjct: 603 EDDKQLLMSQMNFEKKFGKSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTD 662

Query: 62  WGKEVGWIYG 71
           WG E+GWIYG
Sbjct: 663 WGLELGWIYG 672


>30026.m001452 wd40 protein, putative
          Length = 1458

 Score = 88.2 bits (217), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 52/70 (74%)

Query: 2    EDENAAVMPENKLEKKFGQSPVFVASTLLEDGGSLKGASPASLLKEAIHVISCGYEDKTE 61
            E E + ++ +   EK FG S VF+ STL+ +GG  +  +P++L+KEAI VISC YE+KTE
Sbjct: 1082 EYEKSMLISQLSFEKTFGLSSVFIESTLMPNGGVPESVNPSTLIKEAIQVISCSYEEKTE 1141

Query: 62   WGKEVGWIYG 71
            WGKE+GWIYG
Sbjct: 1142 WGKEIGWIYG 1151


>30068.m002658 cellulose synthase, putative
          Length = 1086

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 25/90 (27%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTL--------LEDGGSLKGASPA----------- 42
           E+ N A++P     KKFG S  FV++          L +G + K   P            
Sbjct: 700 EEINFALIP-----KKFGNSSEFVSTIAKAAFDGLPLAEGPTAKNGRPPGALCIPRKPLD 754

Query: 43  -SLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
            S + EA+++ISC YEDKTEWG+ VGW+YG
Sbjct: 755 PSSIAEAVNIISCWYEDKTEWGQHVGWVYG 784


>29904.m002970 Cellulose synthase A catalytic subunit 1
           [UDP-forming], putative
          Length = 1059

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/82 (43%), Positives = 44/82 (53%), Gaps = 20/82 (24%)

Query: 10  PENKLEKKFGQSPVFVASTL--------LEDGGSLK-GASPASLL-----------KEAI 49
           P+  L KKFG S +F  S          L D  S+K G  P +LL            EA+
Sbjct: 676 PDLNLPKKFGNSVMFNESIAVAEYQGRPLADHVSVKNGRPPGALLVPRPPLDAPTVAEAV 735

Query: 50  HVISCGYEDKTEWGKEVGWIYG 71
            VISC YEDKTEWG+++GWIYG
Sbjct: 736 AVISCWYEDKTEWGEKIGWIYG 757


>29986.m001674 Cellulose synthase A catalytic subunit 3
           [UDP-forming], putative
          Length = 1162

 Score = 56.2 bits (134), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/81 (46%), Positives = 42/81 (51%), Gaps = 25/81 (30%)

Query: 14  LEKKFGQSPVFVAST--------LLED----------GGSLKGASP-----ASLLKEAIH 50
           L K+FG S    AS         LL+D           GSL  A P     A+ + EAI 
Sbjct: 782 LPKRFGNSTSLAASIPIAEYQGRLLQDVQGRGNHGRPAGSL--AVPREPLDAATVAEAIS 839

Query: 51  VISCGYEDKTEWGKEVGWIYG 71
           VISC YEDKTEWGK VGWIYG
Sbjct: 840 VISCFYEDKTEWGKRVGWIYG 860


>30073.m002256 Cellulose synthase A catalytic subunit 3
           [UDP-forming], putative
          Length = 1143

 Score = 56.2 bits (134), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/90 (40%), Positives = 43/90 (47%), Gaps = 25/90 (27%)

Query: 2   EDENAAVMPENKLEKKFGQSPVFVASTL--------LEDGGSLKGASP------------ 41
           E+ N ++ P     KKFG S   V S          L D  ++K   P            
Sbjct: 757 EEMNLSLFP-----KKFGNSTFLVDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRDLLD 811

Query: 42  ASLLKEAIHVISCGYEDKTEWGKEVGWIYG 71
           AS + EAI VISC YEDKTEWG  +GWIYG
Sbjct: 812 ASTVAEAISVISCWYEDKTEWGHRIGWIYG 841


>30162.m001289 cellulose synthase, putative
          Length = 1122

 Score = 52.4 bits (124), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 20/80 (25%)

Query: 12  NKLEKKFGQSPVFVASTL--------LEDGGSLKGASP------------ASLLKEAIHV 51
           N L K+FG S +   S          L D  ++K   P            A+ + E++ V
Sbjct: 738 NLLPKRFGNSTMLAESIPIAEYQARPLADHPAVKYGRPPGALRVPREPLDATTVAESVSV 797

Query: 52  ISCGYEDKTEWGKEVGWIYG 71
           ISC YEDKTEWG  VGWIYG
Sbjct: 798 ISCWYEDKTEWGDRVGWIYG 817


>29603.m000539 cellulose synthase, putative
          Length = 762

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 13  KLEKKFGQSPVFVASTLLE-DGGSLKGASPASLLKEAIHVISCGYEDKTEWGKEVGWIY 70
           +L+  FG S  F+ S   +    S++    +SLL+EA  + SC YE+ T+WGKEVG++Y
Sbjct: 383 QLKNSFGTSNEFIKSLKPDYKPSSMRREGESSLLQEAKVLASCTYENSTKWGKEVGFLY 441


>29603.m000541 transferase, putative
          Length = 570

 Score = 46.2 bits (108), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 13  KLEKKFGQSPVFVASTLLE-DGGSLKGASPASLLKEAIHVISCGYEDKTEWGKEVGWIY 70
           KL K FG S  F+ S   +    S++    +SLL+E   + SC YE+ TEWGK VG++Y
Sbjct: 420 KLRKSFGTSNEFIKSLKPDYKPSSMRRKRDSSLLQEMEALASCTYENDTEWGKVVGFMY 478